RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZFATQ9P243 1243 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 LMTK3Q96Q04 1460 aa3.63□□□□□ -1.83
XRN1-210ENST00000472697 KDM2BQ8NHM5 1336 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 XYLBO75191 536 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 ALDH1L1O75891 902 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 RAPGEF3O95398 923 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 MYCLP1P12525 358 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 SELPP16109 830 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 VARSP26640 1264 aaKnown RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 CTSOP43234 321 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 TTF1Q15361 905 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 SKOR2Q2VWA4 1001 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 APPBP2Q92624 585 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 TCF12Q99081 682 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 KLF16Q9BXK1 252 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 DNAJC25Q9H1X3 360 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 GPAMQ9HCL2 828 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 BRMS1Q9HCU9 246 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 TTBK1Q5TCY1 1321 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 HMGXB3Q12766 1538 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 TGFBR3LH3BV60 316 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 FAM153BP0C7A2 387 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 RHOQP17081 205 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 LIG3P49916 1009 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 C10orf62Q5T681 223 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 RHPN1Q8TCX5 695 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 ZSCAN10Q96SZ4 725 aaPredicted RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 GSX2Q9BZM3 304 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 EHD4Q9H223 541 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 SIRPGQ9P1W8 387 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 PNMA2Q9UL42 364 aa3.62□□□□□ -1.83
XRN1-210ENST00000472697 NOB1Q9ULX3 412 aaKnown RBP3.62□□□□□ -1.83
XRN1-210ENST00000472697 UPK3BL1B0FP48 263 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 UPK3BL2E5RIL1 263 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 DDAH1O94760 285 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 ALDH1A1P00352 501 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 ADH1AP07327 375 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 CES1P23141 567 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 CNGA1P29973 690 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 GNALP38405 381 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 LSRQ86X29 649 aaPredicted RBP3.61□□□□□ -1.83
XRN1-210ENST00000472697 COG1Q8WTW3 980 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 TIFAQ96CG3 184 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 CORINQ9Y5Q5 1042 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 RIMBP3CA6NJZ7 1639 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 RIMBP3BA6NNM3 1639 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 RIMBP3Q9UFD9 1639 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 NCAPD3P42695 1498 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 J3QL48 77 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 CREB3O43889 395 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 MMP20O60882 483 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 GRIA2P42262 883 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 TYRO3Q06418 890 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 POU4F2Q12837 409 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 MTMR1Q13613 665 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 TMEM214Q6NUQ4 689 aaKnown RBP3.61□□□□□ -1.83
XRN1-210ENST00000472697 FAM196AQ6ZSG2 479 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 NSUN5Q96P11 429 aaKnown RBP3.61□□□□□ -1.83
XRN1-210ENST00000472697 RSRP1Q9BUV0 290 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 ZIM2Q9NZV7 527 aa3.61□□□□□ -1.83
XRN1-210ENST00000472697 ADCY3O60266 1144 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 PDE8AO60658 829 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 MCL1Q07820 350 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 COL9A2Q14055 689 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 ARSJQ5FYB0 599 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 SNAP47Q5SQN1 464 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 TTBK2Q6IQ55 1244 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 GALNT12Q8IXK2 581 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 ANKRD24Q8TF21 1146 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 FEZ1Q99689 392 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 NOC4LQ9BVI4 516 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 NIFKQ9BYG3 293 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 HOMER2Q9NSB8 354 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 ABI2Q9NYB9 513 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 CCDC189A1A4V9 331 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 FAM221AA4D161 298 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 ECEL1O95672 775 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 CENPBP07199 599 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 THBS1P07996 1170 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 VIL1P09327 827 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 ACRP10323 421 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 VEGFBP49765 207 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 SSRP1Q08945 709 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 NNTQ13423 1086 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 BIRC2Q13490 618 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 C16orf86Q6ZW13 317 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 C11orf96Q7Z7L8 435 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 ZCRB1Q8TBF4 217 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 NT5C1AQ9BXI3 368 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 RTFDC1Q9BY42 306 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 ASPSCR1Q9BZE9 553 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 RBSNQ9H1K0 784 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 SUV39H2Q9H5I1 410 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 KCNQ5Q9NR82 932 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 DZANK1Q9NVP4 752 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 ZMYM5Q9UJ78 669 aa3.6□□□□□ -1.83
XRN1-210ENST00000472697 POLR3KQ9Y2Y1 108 aaPredicted RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 SUPT16HQ9Y5B9 1047 aaKnown RBP3.6□□□□□ -1.83
XRN1-210ENST00000472697 TBX1O43435 398 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 KCNQ2O43526 872 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms