RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 C3orf58Q8NDZ4 430 aa9.76□□□□□ -0.85
CLK1-209ENST00000472679 UNCXA6NJT0 531 aa9.75□□□□□ -0.85
CLK1-209ENST00000472679 EIF4BP23588 611 aaKnown RBP9.75□□□□□ -0.85
CLK1-209ENST00000472679 DTHD1Q6ZMT9 781 aa9.75□□□□□ -0.85
CLK1-209ENST00000472679 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
CLK1-209ENST00000472679 PPP4R2Q9NY27 417 aa9.75□□□□□ -0.85
CLK1-209ENST00000472679 H3BRJ5 948 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 SOX1O00570 391 aaPredicted RBP9.74□□□□□ -0.85
CLK1-209ENST00000472679 USP17L7P0C7H9 530 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 SETDB1Q15047 1291 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 ZNF423Q2M1K9 1284 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
CLK1-209ENST00000472679 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 TM4SF5O14894 197 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 CTSHP09668 335 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
CLK1-209ENST00000472679 CABP4P57796 275 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 PCDH1Q08174 1060 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 FAAP100Q0VG06 881 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 GALNT11Q8NCW6 608 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 CLEC4MQ9H2X3 399 aaPredicted RBP9.73□□□□□ -0.85
CLK1-209ENST00000472679 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
CLK1-209ENST00000472679 PIK3R2O00459 728 aa9.72□□□□□ -0.85
CLK1-209ENST00000472679 FSCN2O14926 492 aa9.72□□□□□ -0.85
CLK1-209ENST00000472679 SORBS3O60504 671 aa9.72□□□□□ -0.85
CLK1-209ENST00000472679 GSTT1P30711 240 aa9.72□□□□□ -0.85
CLK1-209ENST00000472679 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
CLK1-209ENST00000472679 IKBKEQ14164 716 aa9.72□□□□□ -0.85
CLK1-209ENST00000472679 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
CLK1-209ENST00000472679 FMR1NBQ8N0W7 255 aaPredicted RBP9.72□□□□□ -0.85
CLK1-209ENST00000472679 TRIM28Q13263 835 aaKnown RBP9.71□□□□□ -0.86
CLK1-209ENST00000472679 SLC7A3Q8WY07 619 aa9.71□□□□□ -0.86
CLK1-209ENST00000472679 MRS2Q9HD23 443 aa9.71□□□□□ -0.86
CLK1-209ENST00000472679 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
CLK1-209ENST00000472679 VTI1BQ9UEU0 232 aa9.71□□□□□ -0.86
CLK1-209ENST00000472679 XRCC5P13010 732 aaKnown RBP9.7□□□□□ -0.86
CLK1-209ENST00000472679 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
CLK1-209ENST00000472679 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
CLK1-209ENST00000472679 DTWD1Q8N5C7 304 aa9.7□□□□□ -0.86
CLK1-209ENST00000472679 KLHDC7BQ96G42 594 aa9.7□□□□□ -0.86
CLK1-209ENST00000472679 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 FBXO24O75426 580 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 RAC1P63000 192 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 RPS26P11Q5JNZ5 115 aaPredicted RBP9.69□□□□□ -0.86
CLK1-209ENST00000472679 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 SEC31BQ9NQW1 1179 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 KCNK4Q9NYG8 393 aa9.69□□□□□ -0.86
CLK1-209ENST00000472679 KIAA1522Q9P206 1035 aaPredicted RBP9.69□□□□□ -0.86
CLK1-209ENST00000472679 DDX3YO15523 660 aaKnown RBP9.68□□□□□ -0.86
CLK1-209ENST00000472679 B3GALT4O96024 378 aa9.68□□□□□ -0.86
CLK1-209ENST00000472679 GRIK4Q16099 956 aa9.68□□□□□ -0.86
CLK1-209ENST00000472679 DLL1O00548 723 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 GSK3AP49840 483 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 C19orf57Q0VDD7 668 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 FOXD4L6Q3SYB3 417 aaPredicted RBP9.67□□□□□ -0.86
CLK1-209ENST00000472679 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 LDLRAD1Q5T700 205 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 FOXD4L3Q6VB84 417 aaPredicted RBP9.67□□□□□ -0.86
CLK1-209ENST00000472679 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 WNT8BQ93098 351 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
CLK1-209ENST00000472679 OSGEPQ9NPF4 335 aa9.67□□□□□ -0.86
CLK1-209ENST00000472679 ADAM11O75078 769 aa9.66□□□□□ -0.86
CLK1-209ENST00000472679 ELNP15502 786 aa9.66□□□□□ -0.86
CLK1-209ENST00000472679 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
CLK1-209ENST00000472679 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
CLK1-209ENST00000472679 ZFYVE1Q9HBF4 777 aa9.66□□□□□ -0.86
CLK1-209ENST00000472679 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
CLK1-209ENST00000472679 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
CLK1-209ENST00000472679 CD68P34810 354 aaPredicted RBP9.65□□□□□ -0.86
CLK1-209ENST00000472679 GSTM4Q03013 218 aa9.65□□□□□ -0.86
CLK1-209ENST00000472679 CRELD1Q96HD1 420 aa9.65□□□□□ -0.86
CLK1-209ENST00000472679 SOX17Q9H6I2 414 aaPredicted RBP9.65□□□□□ -0.86
CLK1-209ENST00000472679 GPN3Q9UHW5 284 aaPredicted RBP9.65□□□□□ -0.86
CLK1-209ENST00000472679 PPM1HQ9ULR3 514 aa9.65□□□□□ -0.86
CLK1-209ENST00000472679 TTF2Q9UNY4 1162 aaKnown RBP9.65□□□□□ -0.86
CLK1-209ENST00000472679 SELPP16109 830 aa9.64□□□□□ -0.87
CLK1-209ENST00000472679 ARL4DP49703 201 aa9.64□□□□□ -0.87
CLK1-209ENST00000472679 NLRP12P59046 1061 aa9.64□□□□□ -0.87
CLK1-209ENST00000472679 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
CLK1-209ENST00000472679 NECAB3Q96P71 396 aaPredicted RBP9.64□□□□□ -0.87
CLK1-209ENST00000472679 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
CLK1-209ENST00000472679 BACH2Q9BYV9 841 aa9.64□□□□□ -0.87
CLK1-209ENST00000472679 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 RNF225M0QZC1 329 aaPredicted RBP9.63□□□□□ -0.87
CLK1-209ENST00000472679 WISP1O95388 367 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 KCNMA1Q12791 1236 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 ANKRD24Q8TF21 1146 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 DCAF5Q96JK2 942 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 NRSN2Q9GZP1 204 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 TMEM39AQ9NV64 488 aa9.63□□□□□ -0.87
CLK1-209ENST00000472679 ENC1O14682 589 aa9.62□□□□□ -0.87
CLK1-209ENST00000472679 PAGE1O75459 146 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms