RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 NUP62CLQ9H1M0 184 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 TNNT1P13805 278 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 LIG1P18858 919 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 SCARF1Q14162 830 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 TTC6Q86TZ1 520 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 SH3TC1Q8TE82 1336 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 CKAP2LQ8IYA6 745 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 LINC00116Q8NCU8 138 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 TSGA10IPQ3SY00 556 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 USP21Q9UK80 565 aa15.54■□□□□ 0.08
SCAMP4-207ENST00000472442 ST3GAL1Q11201 340 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 SYCP1Q15431 976 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 ANO6Q4KMQ2 910 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 FAM173BQ6P4H8 233 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 FERMT3Q86UX7 667 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 CBX8Q9HC52 389 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 CGNQ9P2M7 1197 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 TTC39AQ5SRH9 613 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 ZSCAN25Q6NSZ9 544 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 UTP14AQ9BVJ6 771 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 TRIM5Q9C035 493 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
SCAMP4-207ENST00000472442 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
SCAMP4-207ENST00000472442 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
SCAMP4-207ENST00000472442 RNF20Q5VTR2 975 aa15.52■□□□□ 0.08
SCAMP4-207ENST00000472442 NECAB1Q8N987 351 aa15.52■□□□□ 0.08
SCAMP4-207ENST00000472442 CCDC112Q8NEF3 446 aa15.52■□□□□ 0.08
SCAMP4-207ENST00000472442 PI16Q6UXB8 463 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 AK7Q96M32 723 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 HELLSQ9NRZ9 838 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 HMG20BQ9P0W2 317 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF831Q5JPB2 1677 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 LRP5O75197 1615 aa15.52■□□□□ 0.07
SCAMP4-207ENST00000472442 SPATA31A6Q5VVP1 1343 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 NTSR2O95665 410 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF75DP51815 510 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 KRT85P78386 507 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 FGD1P98174 961 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 TICAM2Q86XR7 235 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 TNMDQ9H2S6 317 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 PDE8BO95263 885 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 PSMA5P28066 241 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 GABPB1Q06547 395 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 PARP10Q53GL7 1025 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 FAM182BQ5T319 152 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 DACT1Q9NYF0 836 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 DDX60Q8IY21 1712 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 CYP21A2P08686 494 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 ZAP70P43403 619 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 ME3Q16798 604 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 CDC37L1Q7L3B6 337 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
SCAMP4-207ENST00000472442 MAST3O60307 1309 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 PLA2G4DQ86XP0 818 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF592Q92610 1267 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 SH2B1Q9NRF2 756 aaPredicted RBP15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 TPCN1Q9ULQ1 816 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 THSD7AQ9UPZ6 1657 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 RPS6KB1P23443 525 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 MCAMP43121 646 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 PAXBP1Q9Y5B6 917 aa15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
SCAMP4-207ENST00000472442 M0R2C6 588 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 TAF3Q5VWG9 929 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 CACTINQ8WUQ7 758 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 OSBP2Q969R2 916 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 BCORQ6W2J9 1755 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 AKAP11Q9UKA4 1901 aa15.49■□□□□ 0.07
SCAMP4-207ENST00000472442 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 TOB2Q14106 344 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 CLIP2Q9UDT6 1046 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 HSPD1P10809 573 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 FGFR2P21802 821 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 CCDC144BQ3MJ40 725 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 CCDC144CPQ8IYA2 1237 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 DSCC1Q9BVC3 393 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 ELP1O95163 1332 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms