RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 LAMA4Q16363 1823 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 LARGE1O95461 756 aa21.77■■□□□ 1.08
GCFC2-208ENST00000472230 GYG1P46976 350 aa21.77■■□□□ 1.08
GCFC2-208ENST00000472230 IMMTQ16891 758 aaKnown RBP21.77■■□□□ 1.08
GCFC2-208ENST00000472230 CCDC83Q8IWF9 413 aa21.77■■□□□ 1.08
GCFC2-208ENST00000472230 PRR5LQ6MZQ0 368 aa21.77■■□□□ 1.08
GCFC2-208ENST00000472230 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.08
GCFC2-208ENST00000472230 PLSCR1O15162 318 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 SERPINB2P05120 415 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 TM4SF1P30408 202 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 FGD1P98174 961 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 PROM2Q8N271 834 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 MAGEB6Q8N7X4 407 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 TPCN1Q9ULQ1 816 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 BAG4O95429 457 aaKnown RBP21.76■■□□□ 1.07
GCFC2-208ENST00000472230 ME3Q16798 604 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 ZNF804BA4D1E1 1349 aa21.76■■□□□ 1.07
GCFC2-208ENST00000472230 E7EWF7 191 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 STOX1Q6ZVD7 989 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 RPGRQ92834 1020 aaKnown RBP21.75■■□□□ 1.07
GCFC2-208ENST00000472230 TFCP2L1Q9NZI6 479 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 IQSEC3Q9UPP2 1182 aaPredicted RBP21.75■■□□□ 1.07
GCFC2-208ENST00000472230 TCRBV5S4A2TA0A5A2 114 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 GRAPQ13588 217 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 COL9A3Q14050 684 aaPredicted RBP21.75■■□□□ 1.07
GCFC2-208ENST00000472230 TOB2Q14106 344 aaPredicted RBP21.75■■□□□ 1.07
GCFC2-208ENST00000472230 TTLL5Q6EMB2 1281 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 Q6ZUG5 572 aa21.75■■□□□ 1.07
GCFC2-208ENST00000472230 GRAPLQ8TC17 118 aaPredicted RBP21.75■■□□□ 1.07
GCFC2-208ENST00000472230 FGAP02671 866 aa21.74■■□□□ 1.07
GCFC2-208ENST00000472230 DEKP35659 375 aaKnown RBP21.74■■□□□ 1.07
GCFC2-208ENST00000472230 GSE1Q14687 1217 aa21.74■■□□□ 1.07
GCFC2-208ENST00000472230 DHX32Q7L7V1 743 aaKnown RBP21.74■■□□□ 1.07
GCFC2-208ENST00000472230 DENND2AQ9ULE3 1009 aa21.74■■□□□ 1.07
GCFC2-208ENST00000472230 TRAK2O60296 914 aa21.73■■□□□ 1.07
GCFC2-208ENST00000472230 APPP05067 770 aa21.73■■□□□ 1.07
GCFC2-208ENST00000472230 ZDHHC9Q9Y397 364 aa21.73■■□□□ 1.07
GCFC2-208ENST00000472230 BRD1O95696 1058 aa21.73■■□□□ 1.07
GCFC2-208ENST00000472230 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
GCFC2-208ENST00000472230 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
GCFC2-208ENST00000472230 ZNF213O14771 459 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 FOXP2O15409 715 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 NECAB1Q8N987 351 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 FAM84BQ96KN1 310 aaPredicted RBP21.72■■□□□ 1.07
GCFC2-208ENST00000472230 WDR33Q9C0J8 1336 aaKnown RBP21.72■■□□□ 1.07
GCFC2-208ENST00000472230 MYH13Q9UKX3 1938 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 A0A0G2JLW4 131 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 WTIPA6NIX2 430 aaPredicted RBP21.72■■□□□ 1.07
GCFC2-208ENST00000472230 HAND2P61296 217 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 ABCF2Q9UG63 623 aa21.72■■□□□ 1.07
GCFC2-208ENST00000472230 SEMA3EO15041 775 aa21.71■■□□□ 1.07
GCFC2-208ENST00000472230 MCTP1Q6DN14 999 aa21.71■■□□□ 1.07
GCFC2-208ENST00000472230 MBD4O95243 580 aa21.7■■□□□ 1.06
GCFC2-208ENST00000472230 GJB2P29033 226 aa21.7■■□□□ 1.06
GCFC2-208ENST00000472230 HIBADHP31937 336 aaKnown RBP21.7■■□□□ 1.06
GCFC2-208ENST00000472230 SKOR2Q2VWA4 1001 aaPredicted RBP21.7■■□□□ 1.06
GCFC2-208ENST00000472230 FBXO33Q7Z6M2 555 aa21.7■■□□□ 1.06
GCFC2-208ENST00000472230 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
GCFC2-208ENST00000472230 STRBPQ96SI9 672 aaKnown RBP21.7■■□□□ 1.06
GCFC2-208ENST00000472230 RAI14Q9P0K7 980 aa21.7■■□□□ 1.06
GCFC2-208ENST00000472230 ANKIB1Q9P2G1 1089 aa21.7■■□□□ 1.06
GCFC2-208ENST00000472230 STK3Q13188 491 aa21.69■■□□□ 1.06
GCFC2-208ENST00000472230 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
GCFC2-208ENST00000472230 BRF1Q92994 677 aa21.69■■□□□ 1.06
GCFC2-208ENST00000472230 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
GCFC2-208ENST00000472230 DDR1Q08345 913 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 RALYLQ86SE5 291 aaKnown RBP21.68■■□□□ 1.06
GCFC2-208ENST00000472230 FLAD1Q8NFF5 587 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 POLRMTO00411 1230 aaKnown RBP21.68■■□□□ 1.06
GCFC2-208ENST00000472230 GNAT2P19087 354 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 CYP7A1P22680 504 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 EXOSC10Q01780 885 aaKnown RBP21.68■■□□□ 1.06
GCFC2-208ENST00000472230 ST3GAL1Q11201 340 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 AKT1S1Q96B36 256 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 ARMT1Q9H993 441 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 LEMD3Q9Y2U8 911 aa21.68■■□□□ 1.06
GCFC2-208ENST00000472230 PATL2C9JE40 543 aaKnown RBP21.67■■□□□ 1.06
GCFC2-208ENST00000472230 KLRK1P26718 216 aa21.67■■□□□ 1.06
GCFC2-208ENST00000472230 NCOA7Q8NI08 942 aa21.67■■□□□ 1.06
GCFC2-208ENST00000472230 TRDNQ13061 729 aa21.67■■□□□ 1.06
GCFC2-208ENST00000472230 CRY2Q49AN0 593 aa21.67■■□□□ 1.06
GCFC2-208ENST00000472230 NLGN1Q8N2Q7 840 aa21.67■■□□□ 1.06
GCFC2-208ENST00000472230 COL1A1P02452 1464 aaPredicted RBP21.66■■□□□ 1.06
GCFC2-208ENST00000472230 XDHP47989 1333 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 STX6O43752 255 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 ALX1Q15699 326 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 NAPBQ9H115 298 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 TNS1Q9HBL0 1735 aaKnown RBP21.66■■□□□ 1.06
GCFC2-208ENST00000472230 SYT1P21579 422 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 COL23A1Q86Y22 540 aaPredicted RBP21.66■■□□□ 1.06
GCFC2-208ENST00000472230 NACAP1Q9BZK3 213 aa21.66■■□□□ 1.06
GCFC2-208ENST00000472230 ZMYM6O95789 1325 aa21.65■■□□□ 1.06
GCFC2-208ENST00000472230 PDS5AQ29RF7 1337 aaKnown RBP21.65■■□□□ 1.06
GCFC2-208ENST00000472230 MCM5P33992 734 aa21.65■■□□□ 1.06
GCFC2-208ENST00000472230 GTF3C6Q969F1 213 aa21.65■■□□□ 1.06
GCFC2-208ENST00000472230 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
GCFC2-208ENST00000472230 IFNL3Q8IZI9 196 aa21.64■■□□□ 1.06
GCFC2-208ENST00000472230 SLC4A4Q9Y6R1 1079 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms