RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 OSBPL3Q9H4L5 887 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 PDE4AP27815 886 aa20.51■□□□□ 0.87
CCM2-205ENST00000472223 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
CCM2-205ENST00000472223 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
CCM2-205ENST00000472223 USP17L3A6NCW0 530 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 USP17L4A6NCW7 530 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 ZBTB22O15209 634 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 GTF2IP78347 998 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
CCM2-205ENST00000472223 USP17L1Q7RTZ2 530 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 PDS5AQ29RF7 1337 aaKnown RBP20.5■□□□□ 0.87
CCM2-205ENST00000472223 SBF1O95248 1867 aa20.5■□□□□ 0.87
CCM2-205ENST00000472223 DICER1Q9UPY3 1922 aaKnown RBP20.49■□□□□ 0.87
CCM2-205ENST00000472223 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 MCAMP43121 646 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 RASGRF1Q13972 1273 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 LRRFIP1Q32MZ4 808 aaKnown RBP20.49■□□□□ 0.87
CCM2-205ENST00000472223 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 TSHZ3Q63HK5 1081 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 HAUS7Q99871 368 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 HMG20BQ9P0W2 317 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
CCM2-205ENST00000472223 CIAPIN1Q6FI81 312 aa20.48■□□□□ 0.87
CCM2-205ENST00000472223 RAD17O75943 681 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 ZAP70P43403 619 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 PI4K2BQ8TCG2 481 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 MYO3BQ8WXR4 1341 aa20.47■□□□□ 0.87
CCM2-205ENST00000472223 FZD9O00144 591 aa20.46■□□□□ 0.87
CCM2-205ENST00000472223 GOLIM4O00461 696 aa20.46■□□□□ 0.87
CCM2-205ENST00000472223 MFSD14BQ5SR56 506 aa20.46■□□□□ 0.87
CCM2-205ENST00000472223 RILPL2Q969X0 211 aa20.46■□□□□ 0.87
CCM2-205ENST00000472223 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCM2-205ENST00000472223 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
CCM2-205ENST00000472223 IGSF3O75054 1194 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 FKBP1AP62942 108 aaKnown RBP20.45■□□□□ 0.86
CCM2-205ENST00000472223 SCARF1Q14162 830 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 EVI5LQ96CN4 794 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
CCM2-205ENST00000472223 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 LDHBP07195 334 aaKnown RBP20.44■□□□□ 0.86
CCM2-205ENST00000472223 PRELPP51888 382 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 CXCL9Q07325 125 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 MAP3K12Q12852 859 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 ZSCAN25Q6NSZ9 544 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 SUGT1Q9Y2Z0 365 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
CCM2-205ENST00000472223 PSMD14O00487 310 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 MAP4K4O95819 1239 aaPredicted RBP20.43■□□□□ 0.86
CCM2-205ENST00000472223 CYP2E1P05181 493 aaPredicted RBP20.43■□□□□ 0.86
CCM2-205ENST00000472223 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
CCM2-205ENST00000472223 PI16Q6UXB8 463 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 SLF2Q8IX21 1173 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 HDAC9Q9UKV0 1011 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 MAST3O60307 1309 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 AKAP11Q9UKA4 1901 aa20.43■□□□□ 0.86
CCM2-205ENST00000472223 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
CCM2-205ENST00000472223 VIL1P09327 827 aaKnown RBP20.42■□□□□ 0.86
CCM2-205ENST00000472223 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
CCM2-205ENST00000472223 DACT2Q5SW24 774 aa20.42■□□□□ 0.86
CCM2-205ENST00000472223 DZIP1Q86YF9 867 aaKnown RBP20.42■□□□□ 0.86
CCM2-205ENST00000472223 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
CCM2-205ENST00000472223 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
CCM2-205ENST00000472223 KCNQ5Q9NR82 932 aa20.42■□□□□ 0.86
CCM2-205ENST00000472223 MMP14P50281 582 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 GSTO1P78417 241 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 TMED8Q6PL24 325 aaPredicted RBP20.41■□□□□ 0.86
CCM2-205ENST00000472223 TBC1D9Q6ZT07 1266 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 SKAP1Q86WV1 359 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 GPC2Q8N158 579 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
CCM2-205ENST00000472223 PSME4Q14997 1843 aa20.4■□□□□ 0.86
CCM2-205ENST00000472223 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
CCM2-205ENST00000472223 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
CCM2-205ENST00000472223 KBTBD3Q8NAB2 608 aa20.4■□□□□ 0.86
CCM2-205ENST00000472223 AK9Q5TCS8 1911 aa20.39■□□□□ 0.86
CCM2-205ENST00000472223 COL4A5P29400 1685 aa20.39■□□□□ 0.86
CCM2-205ENST00000472223 HIP1O00291 1037 aa20.39■□□□□ 0.85
CCM2-205ENST00000472223 LDHCP07864 332 aa20.39■□□□□ 0.85
CCM2-205ENST00000472223 ZFYP08048 801 aaPredicted RBP20.39■□□□□ 0.85
CCM2-205ENST00000472223 CASC1Q6TDU7 716 aa20.39■□□□□ 0.85
CCM2-205ENST00000472223 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.85
CCM2-205ENST00000472223 ANTXR1Q9H6X2 564 aa20.39■□□□□ 0.85
CCM2-205ENST00000472223 TTF2Q9UNY4 1162 aaKnown RBP20.39■□□□□ 0.85
CCM2-205ENST00000472223 SCN9AQ15858 1988 aa20.39■□□□□ 0.85
CCM2-205ENST00000472223 F8W031 263 aaPredicted RBP20.38■□□□□ 0.85
CCM2-205ENST00000472223 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms