RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ZC3H15Q8WU90 426 aaKnown RBP18.81■□□□□ 0.6
CALD1-215ENST00000472096 PGAP2Q9UHJ9 254 aa18.81■□□□□ 0.6
CALD1-215ENST00000472096 RLBP1P12271 317 aa18.8■□□□□ 0.6
CALD1-215ENST00000472096 IL1R1P14778 569 aa18.8■□□□□ 0.6
CALD1-215ENST00000472096 DZIP1LQ8IYY4 767 aaKnown RBP18.8■□□□□ 0.6
CALD1-215ENST00000472096 DNAJC5GQ8N7S2 189 aa18.8■□□□□ 0.6
CALD1-215ENST00000472096 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
CALD1-215ENST00000472096 PDE8BO95263 885 aa18.79■□□□□ 0.6
CALD1-215ENST00000472096 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
CALD1-215ENST00000472096 GTF2IP78347 998 aa18.79■□□□□ 0.6
CALD1-215ENST00000472096 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
CALD1-215ENST00000472096 MTX1Q13505 466 aa18.78■□□□□ 0.6
CALD1-215ENST00000472096 RBM26Q5T8P6 1007 aaKnown RBP18.78■□□□□ 0.6
CALD1-215ENST00000472096 ATG9AQ7Z3C6 839 aa18.78■□□□□ 0.6
CALD1-215ENST00000472096 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
CALD1-215ENST00000472096 SIL1Q9H173 461 aa18.78■□□□□ 0.6
CALD1-215ENST00000472096 TMEM88BA6NKF7 163 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 TRAF5O00463 557 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 CIAO1O76071 339 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 GNAI2P04899 355 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 GYG1P46976 350 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 FMR1Q06787 632 aaKnown RBP eCLIP18.77■□□□□ 0.6
CALD1-215ENST00000472096 GLIS2Q9BZE0 524 aaPredicted RBP18.77■□□□□ 0.6
CALD1-215ENST00000472096 TSPYL2Q9H2G4 693 aaPredicted RBP18.77■□□□□ 0.6
CALD1-215ENST00000472096 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
CALD1-215ENST00000472096 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.6
CALD1-215ENST00000472096 SRGAP3O43295 1099 aa18.76■□□□□ 0.59
CALD1-215ENST00000472096 FGFR2P21802 821 aa18.76■□□□□ 0.59
CALD1-215ENST00000472096 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
CALD1-215ENST00000472096 PUM3Q15397 648 aaKnown RBP18.76■□□□□ 0.59
CALD1-215ENST00000472096 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
CALD1-215ENST00000472096 FAM84BQ96KN1 310 aaPredicted RBP18.76■□□□□ 0.59
CALD1-215ENST00000472096 MYOZ2Q9NPC6 264 aa18.76■□□□□ 0.59
CALD1-215ENST00000472096 CERS5Q8N5B7 392 aa18.75■□□□□ 0.59
CALD1-215ENST00000472096 TDRD7Q8NHU6 1098 aaKnown RBP18.75■□□□□ 0.59
CALD1-215ENST00000472096 GGA3Q9NZ52 723 aa18.75■□□□□ 0.59
CALD1-215ENST00000472096 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
CALD1-215ENST00000472096 ASTN2O75129 1339 aaPredicted RBP18.74■□□□□ 0.59
CALD1-215ENST00000472096 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
CALD1-215ENST00000472096 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
CALD1-215ENST00000472096 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
CALD1-215ENST00000472096 KIAA0825Q8IV33 1275 aa18.74■□□□□ 0.59
CALD1-215ENST00000472096 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
CALD1-215ENST00000472096 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
CALD1-215ENST00000472096 CNTNAP1P78357 1384 aa18.73■□□□□ 0.59
CALD1-215ENST00000472096 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
CALD1-215ENST00000472096 IL15P40933 162 aaPredicted RBP18.73■□□□□ 0.59
CALD1-215ENST00000472096 MMP14P50281 582 aa18.73■□□□□ 0.59
CALD1-215ENST00000472096 OGFOD1Q8N543 542 aa18.73■□□□□ 0.59
CALD1-215ENST00000472096 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
CALD1-215ENST00000472096 THSD7BQ9C0I4 1608 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 SASH1O94885 1247 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 SLC5A1P13866 664 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 SCARF1Q14162 830 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 KRT26Q7Z3Y9 468 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 VPS37DQ86XT2 251 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 LPIN2Q92539 896 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 DCPSQ96C86 337 aaKnown RBP18.72■□□□□ 0.59
CALD1-215ENST00000472096 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
CALD1-215ENST00000472096 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
CALD1-215ENST00000472096 ATP2B3Q16720 1220 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 ANGEL2Q5VTE6 544 aaKnown RBP18.71■□□□□ 0.59
CALD1-215ENST00000472096 CST9Q5W186 159 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 USP48Q86UV5 1035 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.59
CALD1-215ENST00000472096 IQSEC3Q9UPP2 1182 aaPredicted RBP18.71■□□□□ 0.59
CALD1-215ENST00000472096 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
CALD1-215ENST00000472096 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
CALD1-215ENST00000472096 CELF2O95319 508 aaKnown RBP18.7■□□□□ 0.58
CALD1-215ENST00000472096 MS4A1P11836 297 aa18.7■□□□□ 0.58
CALD1-215ENST00000472096 BCAMP50895 628 aa18.7■□□□□ 0.58
CALD1-215ENST00000472096 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
CALD1-215ENST00000472096 MFSD14BQ5SR56 506 aa18.7■□□□□ 0.58
CALD1-215ENST00000472096 JMYQ8N9B5 988 aa18.7■□□□□ 0.58
CALD1-215ENST00000472096 F8W031 263 aaPredicted RBP18.69■□□□□ 0.58
CALD1-215ENST00000472096 WNT10BO00744 389 aa18.69■□□□□ 0.58
CALD1-215ENST00000472096 PYGBP11216 843 aa18.69■□□□□ 0.58
CALD1-215ENST00000472096 DLK2Q6UY11 383 aa18.69■□□□□ 0.58
CALD1-215ENST00000472096 SULF1Q8IWU6 871 aa18.69■□□□□ 0.58
CALD1-215ENST00000472096 RNF25Q96BH1 459 aaPredicted RBP18.69■□□□□ 0.58
CALD1-215ENST00000472096 ZBED3Q96IU2 234 aaPredicted RBP18.69■□□□□ 0.58
CALD1-215ENST00000472096 ABT1Q9ULW3 272 aaKnown RBP18.69■□□□□ 0.58
CALD1-215ENST00000472096 RASSF10A6NK89 507 aa18.68■□□□□ 0.58
CALD1-215ENST00000472096 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
CALD1-215ENST00000472096 ZNF408Q9H9D4 720 aa18.68■□□□□ 0.58
CALD1-215ENST00000472096 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
CALD1-215ENST00000472096 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
CALD1-215ENST00000472096 MVPQ14764 893 aaKnown RBP18.67■□□□□ 0.58
CALD1-215ENST00000472096 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
CALD1-215ENST00000472096 TLL2Q9Y6L7 1015 aa18.67■□□□□ 0.58
CALD1-215ENST00000472096 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
CALD1-215ENST00000472096 TFCP2Q12800 502 aa18.66■□□□□ 0.58
CALD1-215ENST00000472096 MTMR14Q8NCE2 650 aa18.66■□□□□ 0.58
CALD1-215ENST00000472096 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
CALD1-215ENST00000472096 ADORA1P30542 326 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms