RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 IFT57Q9NWB7 429 aa24.47■■□□□ 1.51
SORT1-203ENST00000471996 LAMB1P07942 1786 aa24.47■■□□□ 1.51
SORT1-203ENST00000471996 CLRN2A0PK11 232 aa24.46■■□□□ 1.51
SORT1-203ENST00000471996 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
SORT1-203ENST00000471996 SLC9C1Q4G0N8 1177 aa24.46■■□□□ 1.51
SORT1-203ENST00000471996 PI4KAP2A4QPH2 592 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 SPDYE2BA6NHP3 402 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 SPDYE6P0CI01 402 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 ARHGEF6Q15052 776 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 CFAP100Q494V2 611 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 CCDC30Q5VVM6 783 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 PI4KAP1Q8N8J0 262 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 C8orf58Q8NAV2 365 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 CHMP4AQ9BY43 222 aa24.45■■□□□ 1.5
SORT1-203ENST00000471996 ITGA6P23229 1130 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 KCNJ4P48050 445 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 GNAI1P63096 354 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 NEXNQ0ZGT2 675 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 PRMT6Q96LA8 375 aaPredicted RBP24.44■■□□□ 1.5
SORT1-203ENST00000471996 MPHOSPH8Q99549 860 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 VEZTQ9HBM0 779 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 PTCH2Q9Y6C5 1203 aa24.44■■□□□ 1.5
SORT1-203ENST00000471996 H7C1W4 665 aa24.43■■□□□ 1.5
SORT1-203ENST00000471996 CWF19L2Q2TBE0 894 aaKnown RBP24.43■■□□□ 1.5
SORT1-203ENST00000471996 SLC4A8Q2Y0W8 1093 aa24.43■■□□□ 1.5
SORT1-203ENST00000471996 OTUD5Q96G74 571 aa24.43■■□□□ 1.5
SORT1-203ENST00000471996 MS4A4AQ96JQ5 239 aa24.43■■□□□ 1.5
SORT1-203ENST00000471996 NEURL1BA8MQ27 555 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 F8W031 263 aaPredicted RBP24.42■■□□□ 1.5
SORT1-203ENST00000471996 H0YGN5 161 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 CHRNDQ07001 517 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 RASA3Q14644 834 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 UBE3BQ7Z3V4 1068 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 OPTNQ96CV9 577 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 PLA2G12BQ9BX93 195 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 SPEF2Q9C093 1822 aa24.42■■□□□ 1.5
SORT1-203ENST00000471996 AOX1Q06278 1338 aa24.41■■□□□ 1.5
SORT1-203ENST00000471996 MYBBP1AQ9BQG0 1328 aaKnown RBP24.41■■□□□ 1.5
SORT1-203ENST00000471996 IRS2Q9Y4H2 1338 aa24.41■■□□□ 1.5
SORT1-203ENST00000471996 ELP3Q9H9T3 547 aa24.41■■□□□ 1.5
SORT1-203ENST00000471996 ZFYVE28Q9HCC9 887 aa24.41■■□□□ 1.5
SORT1-203ENST00000471996 SZT2Q5T011 3432 aa24.4■■□□□ 1.5
SORT1-203ENST00000471996 FKBP1AP62942 108 aaKnown RBP24.4■■□□□ 1.5
SORT1-203ENST00000471996 CALD1Q05682 793 aaKnown RBP24.4■■□□□ 1.5
SORT1-203ENST00000471996 C15orf52Q6ZUT6 534 aaKnown RBP24.4■■□□□ 1.5
SORT1-203ENST00000471996 BRI3BPQ8WY22 251 aa24.4■■□□□ 1.5
SORT1-203ENST00000471996 SNAP23O00161 211 aa24.39■■□□□ 1.49
SORT1-203ENST00000471996 CSF1RP07333 972 aa24.39■■□□□ 1.49
SORT1-203ENST00000471996 IL1R1P14778 569 aa24.39■■□□□ 1.49
SORT1-203ENST00000471996 TAF1CQ15572 869 aaPredicted RBP24.39■■□□□ 1.49
SORT1-203ENST00000471996 MYH3P11055 1940 aa24.37■■□□□ 1.49
SORT1-203ENST00000471996 CCL15-CCL14A0A0B4J2E2 113 aa24.37■■□□□ 1.49
SORT1-203ENST00000471996 MYCP01106 439 aaPredicted RBP24.37■■□□□ 1.49
SORT1-203ENST00000471996 RBM5P52756 815 aaKnown RBP eCLIP24.37■■□□□ 1.49
SORT1-203ENST00000471996 CCL15Q16663 113 aa24.37■■□□□ 1.49
SORT1-203ENST00000471996 TAF5LO75529 589 aa24.36■■□□□ 1.49
SORT1-203ENST00000471996 GTF2A2P52657 109 aa24.36■■□□□ 1.49
SORT1-203ENST00000471996 TNFAIP1Q13829 316 aa24.36■■□□□ 1.49
SORT1-203ENST00000471996 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.36■■□□□ 1.49
SORT1-203ENST00000471996 ZNF804AQ7Z570 1209 aa24.36■■□□□ 1.49
SORT1-203ENST00000471996 CNKSR2Q8WXI2 1034 aa24.36■■□□□ 1.49
SORT1-203ENST00000471996 CASP7P55210 303 aa24.35■■□□□ 1.49
SORT1-203ENST00000471996 GCKRQ14397 625 aa24.35■■□□□ 1.49
SORT1-203ENST00000471996 CHRDL2Q6WN34 429 aa24.35■■□□□ 1.49
SORT1-203ENST00000471996 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
SORT1-203ENST00000471996 ECM29Q5VYK3 1845 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 SPDYE2Q495Y8 402 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 FAM43AQ8N2R8 423 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 HELBQ8NG08 1087 aaPredicted RBP24.34■■□□□ 1.49
SORT1-203ENST00000471996 SH3TC2Q8TF17 1288 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 JAG2Q9Y219 1238 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 TRIOBPQ9H2D6 2365 aa24.34■■□□□ 1.49
SORT1-203ENST00000471996 ANKRD18BA2A2Z9 1011 aa24.33■■□□□ 1.49
SORT1-203ENST00000471996 MAP3K9P80192 1104 aa24.33■■□□□ 1.49
SORT1-203ENST00000471996 TEPSINQ96N21 525 aa24.33■■□□□ 1.49
SORT1-203ENST00000471996 ZNF70Q9UC06 446 aaPredicted RBP24.33■■□□□ 1.49
SORT1-203ENST00000471996 APAF1O14727 1248 aa24.32■■□□□ 1.48
SORT1-203ENST00000471996 VGLL4Q14135 290 aa24.32■■□□□ 1.48
SORT1-203ENST00000471996 STK31Q9BXU1 1019 aa24.32■■□□□ 1.48
SORT1-203ENST00000471996 ARHGAP39Q9C0H5 1083 aa24.32■■□□□ 1.48
SORT1-203ENST00000471996 RBM27Q9P2N5 1060 aaKnown RBP24.32■■□□□ 1.48
SORT1-203ENST00000471996 TLR2O60603 784 aa24.31■■□□□ 1.48
SORT1-203ENST00000471996 KIF22Q14807 665 aa24.31■■□□□ 1.48
SORT1-203ENST00000471996 CDAN1Q8IWY9 1227 aa24.31■■□□□ 1.48
SORT1-203ENST00000471996 WDHD1O75717 1129 aaPredicted RBP24.3■■□□□ 1.48
SORT1-203ENST00000471996 LACTBP83111 547 aaPredicted RBP24.3■■□□□ 1.48
SORT1-203ENST00000471996 G2E3Q7L622 706 aa24.3■■□□□ 1.48
SORT1-203ENST00000471996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.3■■□□□ 1.48
SORT1-203ENST00000471996 TDRD3Q9H7E2 651 aaKnown RBP24.3■■□□□ 1.48
SORT1-203ENST00000471996 SERPINA10Q9UK55 444 aa24.3■■□□□ 1.48
SORT1-203ENST00000471996 CSADQ9Y600 493 aa24.3■■□□□ 1.48
SORT1-203ENST00000471996 GNRH1P01148 92 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 PRMT2P55345 433 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 DPF3Q92784 378 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 MYH16Q9H6N6 1097 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 CEP290O15078 2479 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 FAM205AQ6ZU69 1335 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 OTOFQ9HC10 1997 aa24.29■■□□□ 1.48
SORT1-203ENST00000471996 SHISA4Q96DD7 197 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms