RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 SRA1Q9HD15 236 aaKnown RBP7.94□□□□□ -1.14
CDHR3-208ENST00000471910 SH2B1Q9NRF2 756 aaPredicted RBP7.94□□□□□ -1.14
CDHR3-208ENST00000471910 SOX13Q9UN79 622 aa7.94□□□□□ -1.14
CDHR3-208ENST00000471910 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 H3BRJ5 948 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
CDHR3-208ENST00000471910 BAG6P46379 1132 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 COL9A3Q14050 684 aaPredicted RBP7.93□□□□□ -1.14
CDHR3-208ENST00000471910 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 GLIS3Q8NEA6 775 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 OSBPL7Q9BZF2 842 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 ABCB6Q9NP58 842 aa7.93□□□□□ -1.14
CDHR3-208ENST00000471910 ITPKAP23677 461 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 CDC25BP30305 580 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 IKBKEQ14164 716 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 DDX54Q8TDD1 881 aaKnown RBP7.92□□□□□ -1.14
CDHR3-208ENST00000471910 WNT8BQ93098 351 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 TRIM11Q96F44 468 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 CLEC4MQ9H2X3 399 aaPredicted RBP7.92□□□□□ -1.14
CDHR3-208ENST00000471910 AKAP2Q9Y2D5 859 aa7.92□□□□□ -1.14
CDHR3-208ENST00000471910 EPHA1P21709 976 aa7.91□□□□□ -1.14
CDHR3-208ENST00000471910 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
CDHR3-208ENST00000471910 RPS26P11Q5JNZ5 115 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-208ENST00000471910 VTI1BQ9UEU0 232 aa7.91□□□□□ -1.14
CDHR3-208ENST00000471910 A0A0A0MRY4 1105 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 USP17L7P0C7H9 530 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 PCDH1Q08174 1060 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 VN1R5Q7Z5H4 357 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 ALYREFQ86V81 257 aaKnown RBP7.9□□□□□ -1.14
CDHR3-208ENST00000471910 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 SLC7A3Q8WY07 619 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 FAM161BQ96MY7 647 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 ZNF576Q9H609 170 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 OSGEPQ9NPF4 335 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 RNF19AQ9NV58 838 aa7.9□□□□□ -1.14
CDHR3-208ENST00000471910 FSCN2O14926 492 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 ADAMTSL4Q6UY14 1074 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 ILDR2Q71H61 639 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 FBXO11Q86XK2 927 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 FMR1NBQ8N0W7 255 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-208ENST00000471910 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
CDHR3-208ENST00000471910 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
CDHR3-208ENST00000471910 ESRRAP11474 423 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-208ENST00000471910 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
CDHR3-208ENST00000471910 C19orf57Q0VDD7 668 aa7.88□□□□□ -1.15
CDHR3-208ENST00000471910 CEP44Q9C0F1 390 aa7.88□□□□□ -1.15
CDHR3-208ENST00000471910 SOX17Q9H6I2 414 aaPredicted RBP7.88□□□□□ -1.15
CDHR3-208ENST00000471910 SOX1O00570 391 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-208ENST00000471910 ELNP15502 786 aa7.87□□□□□ -1.15
CDHR3-208ENST00000471910 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
CDHR3-208ENST00000471910 SETDB1Q15047 1291 aa7.87□□□□□ -1.15
CDHR3-208ENST00000471910 GPN3Q9UHW5 284 aaPredicted RBP7.87□□□□□ -1.15
CDHR3-208ENST00000471910 TTF2Q9UNY4 1162 aaKnown RBP7.87□□□□□ -1.15
CDHR3-208ENST00000471910 APBA3O96018 575 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 B3GALT4O96024 378 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 CD68P34810 354 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-208ENST00000471910 GSTM4Q03013 218 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 ZNF423Q2M1K9 1284 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 C3orf58Q8NDZ4 430 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 CRELD1Q96HD1 420 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
CDHR3-208ENST00000471910 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
CDHR3-208ENST00000471910 TAF1CQ15572 869 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-208ENST00000471910 IGF2-ASQ6U949 168 aa7.85□□□□□ -1.15
CDHR3-208ENST00000471910 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
CDHR3-208ENST00000471910 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
CDHR3-208ENST00000471910 CARD10Q9BWT7 1032 aa7.85□□□□□ -1.15
CDHR3-208ENST00000471910 SAMM50Q9Y512 469 aa7.85□□□□□ -1.15
CDHR3-208ENST00000471910 DEAF1O75398 565 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-208ENST00000471910 CYP11A1P05108 521 aa7.84□□□□□ -1.15
CDHR3-208ENST00000471910 RBM25P49756 843 aaKnown RBP7.84□□□□□ -1.15
CDHR3-208ENST00000471910 MRPL58Q14197 206 aaKnown RBP7.84□□□□□ -1.15
CDHR3-208ENST00000471910 TPTE2Q6XPS3 522 aa7.84□□□□□ -1.15
CDHR3-208ENST00000471910 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
CDHR3-208ENST00000471910 C9orf172C9J069 976 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 DLL1O00548 723 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 VAMP1P23763 118 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
CDHR3-208ENST00000471910 ZNF157P51786 506 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-208ENST00000471910 AP3B2Q13367 1082 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 GALNT11Q8NCW6 608 aa7.83□□□□□ -1.16
CDHR3-208ENST00000471910 COL8A1P27658 744 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 HNRNPUQ00839 825 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDHR3-208ENST00000471910 NRG1Q02297 640 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-208ENST00000471910 FAAP100Q0VG06 881 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 CCDC85BQ15834 202 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-208ENST00000471910 GRIK4Q16099 956 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 HP1BP3Q5SSJ5 553 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-208ENST00000471910 EMILIN2Q9BXX0 1053 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
CDHR3-208ENST00000471910 USP31Q70CQ4 1352 aa7.82□□□□□ -1.16
CDHR3-208ENST00000471910 CTSHP09668 335 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms