RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 TBC1D22AQ8WUA7 517 aa23.03■■□□□ 1.28
SNX4-203ENST00000471751 SUGT1Q9Y2Z0 365 aa23.03■■□□□ 1.28
SNX4-203ENST00000471751 AK9Q5TCS8 1911 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 G3V3G9 751 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
SNX4-203ENST00000471751 ZFYP08048 801 aaPredicted RBP23.02■■□□□ 1.28
SNX4-203ENST00000471751 KLRK1P26718 216 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 FKBP1AP62942 108 aaKnown RBP23.02■■□□□ 1.28
SNX4-203ENST00000471751 DCAF8Q5TAQ9 597 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 ZSCAN25Q6NSZ9 544 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
SNX4-203ENST00000471751 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
SNX4-203ENST00000471751 MYH13Q9UKX3 1938 aa23.01■■□□□ 1.27
SNX4-203ENST00000471751 SPTY2D1Q68D10 685 aaPredicted RBP23.01■■□□□ 1.27
SNX4-203ENST00000471751 CHD4Q14839 1912 aa23■■□□□ 1.27
SNX4-203ENST00000471751 ZAP70P43403 619 aa23■■□□□ 1.27
SNX4-203ENST00000471751 SCARF1Q14162 830 aa23■■□□□ 1.27
SNX4-203ENST00000471751 RILPL2Q969X0 211 aa23■■□□□ 1.27
SNX4-203ENST00000471751 DDX24Q9GZR7 859 aaKnown RBP eCLIP23■■□□□ 1.276e-6■■■□□ 19.2
SNX4-203ENST00000471751 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
SNX4-203ENST00000471751 PPIP5K2O43314 1243 aa22.99■■□□□ 1.27
SNX4-203ENST00000471751 CDC45O75419 566 aa22.99■■□□□ 1.27
SNX4-203ENST00000471751 CYP2E1P05181 493 aaPredicted RBP22.99■■□□□ 1.27
SNX4-203ENST00000471751 IARSP41252 1262 aaKnown RBP22.99■■□□□ 1.27
SNX4-203ENST00000471751 DNAJC2Q99543 621 aaKnown RBP22.99■■□□□ 1.27
SNX4-203ENST00000471751 GOLIM4O00461 696 aa22.98■■□□□ 1.27
SNX4-203ENST00000471751 RIMBP2O15034 1052 aa22.98■■□□□ 1.27
SNX4-203ENST00000471751 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
SNX4-203ENST00000471751 SLC51AQ86UW1 340 aa22.98■■□□□ 1.27
SNX4-203ENST00000471751 NFKBIEO00221 500 aa22.97■■□□□ 1.27
SNX4-203ENST00000471751 MMP14P50281 582 aa22.97■■□□□ 1.27
SNX4-203ENST00000471751 MAP3K12Q12852 859 aa22.97■■□□□ 1.27
SNX4-203ENST00000471751 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
SNX4-203ENST00000471751 RUFY2Q8WXA3 655 aa22.97■■□□□ 1.27
SNX4-203ENST00000471751 AOC3Q16853 763 aa22.96■■□□□ 1.27
SNX4-203ENST00000471751 ARHGAP27Q6ZUM4 889 aa22.96■■□□□ 1.27
SNX4-203ENST00000471751 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
SNX4-203ENST00000471751 JDP2Q8WYK2 163 aa22.96■■□□□ 1.27
SNX4-203ENST00000471751 FSD1Q9BTV5 496 aa22.96■■□□□ 1.27
SNX4-203ENST00000471751 ECE2O60344 883 aa22.95■■□□□ 1.26
SNX4-203ENST00000471751 UBE3CQ15386 1083 aa22.95■■□□□ 1.26
SNX4-203ENST00000471751 GPR101Q96P66 508 aaPredicted RBP22.95■■□□□ 1.26
SNX4-203ENST00000471751 SNRKQ9NRH2 765 aa22.95■■□□□ 1.26
SNX4-203ENST00000471751 ZNRF3Q9ULT6 936 aa22.95■■□□□ 1.26
SNX4-203ENST00000471751 DOCK2Q92608 1830 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 EPB41L2O43491 1005 aaKnown RBP22.94■■□□□ 1.26
SNX4-203ENST00000471751 CHMLP26374 656 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 TTLL5Q6EMB2 1281 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 MRIQ9BWK5 157 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 MYO3BQ8WXR4 1341 aa22.94■■□□□ 1.26
SNX4-203ENST00000471751 MYH7P12883 1935 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 USP17L3A6NCW0 530 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 USP17L4A6NCW7 530 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 ERICH6Q7L0X2 663 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 USP17L1Q7RTZ2 530 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 ZNF277Q9NRM2 450 aaPredicted RBP22.93■■□□□ 1.26
SNX4-203ENST00000471751 LRP2BPQ9P2M1 347 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 RAD50Q92878 1312 aa22.93■■□□□ 1.26
SNX4-203ENST00000471751 PSME4Q14997 1843 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 CCDC88AQ3V6T2 1871 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 RNF113AO15541 343 aaKnown RBP22.92■■□□□ 1.26
SNX4-203ENST00000471751 LMNB1P20700 586 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 PI16Q6UXB8 463 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 SLF2Q8IX21 1173 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 ANTXR1Q9H6X2 564 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 HELLSQ9NRZ9 838 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 DIAPH3Q9NSV4 1193 aa22.92■■□□□ 1.26
SNX4-203ENST00000471751 DICER1Q9UPY3 1922 aaKnown RBP22.92■■□□□ 1.26
SNX4-203ENST00000471751 MAP4K4O95819 1239 aaPredicted RBP22.91■■□□□ 1.26
SNX4-203ENST00000471751 DOK7Q18PE1 504 aa22.91■■□□□ 1.26
SNX4-203ENST00000471751 CERS3Q8IU89 383 aa22.91■■□□□ 1.26
SNX4-203ENST00000471751 DBNDD1Q9H9R9 158 aa22.91■■□□□ 1.26
SNX4-203ENST00000471751 IQSEC3Q9UPP2 1182 aaPredicted RBP22.91■■□□□ 1.26
SNX4-203ENST00000471751 MAST3O60307 1309 aa22.91■■□□□ 1.26
SNX4-203ENST00000471751 COL1A1P02452 1464 aaPredicted RBP22.91■■□□□ 1.26
SNX4-203ENST00000471751 LDHBP07195 334 aaKnown RBP22.9■■□□□ 1.26
SNX4-203ENST00000471751 ADD2P35612 726 aa22.9■■□□□ 1.26
SNX4-203ENST00000471751 MFAP1P55081 439 aaKnown RBP22.9■■□□□ 1.26
SNX4-203ENST00000471751 GTF2IP78347 998 aa22.9■■□□□ 1.26
SNX4-203ENST00000471751 GSTO1P78417 241 aa22.9■■□□□ 1.26
SNX4-203ENST00000471751 C8orf34Q49A92 452 aa22.9■■□□□ 1.26
SNX4-203ENST00000471751 TBC1D9Q6ZT07 1266 aa22.9■■□□□ 1.26
SNX4-203ENST00000471751 EDC3Q96F86 508 aaKnown RBP22.9■■□□□ 1.26
SNX4-203ENST00000471751 PIH1D3Q9NQM4 214 aaKnown RBP22.9■■□□□ 1.26
SNX4-203ENST00000471751 LDHCP07864 332 aa22.89■■□□□ 1.26
SNX4-203ENST00000471751 HDLBPQ00341 1268 aaKnown RBP22.89■■□□□ 1.26
SNX4-203ENST00000471751 TNIP1Q15025 636 aa22.89■■□□□ 1.26
SNX4-203ENST00000471751 MFSD14BQ5SR56 506 aa22.89■■□□□ 1.26
SNX4-203ENST00000471751 SLC9C2Q5TAH2 1124 aa22.89■■□□□ 1.26
SNX4-203ENST00000471751 FAM163AQ96GL9 167 aaPredicted RBP22.89■■□□□ 1.26
SNX4-203ENST00000471751 ABCF2Q9UG63 623 aa22.89■■□□□ 1.26
SNX4-203ENST00000471751 SBF1O95248 1867 aa22.89■■□□□ 1.25
SNX4-203ENST00000471751 FZD9O00144 591 aa22.88■■□□□ 1.25
SNX4-203ENST00000471751 IDH1O75874 414 aaKnown RBP22.88■■□□□ 1.25
SNX4-203ENST00000471751 VIL1P09327 827 aaKnown RBP22.88■■□□□ 1.25
SNX4-203ENST00000471751 CHAF1AQ13111 956 aaPredicted RBP22.88■■□□□ 1.25
SNX4-203ENST00000471751 ZMYM1Q5SVZ6 1142 aa22.88■■□□□ 1.25
SNX4-203ENST00000471751 APPBP2Q92624 585 aa22.88■■□□□ 1.25
SNX4-203ENST00000471751 BACH2Q9BYV9 841 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms