RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
SSR4-207ENST00000471724 ARID4AP29374 1257 aaPredicted RBP17.2■□□□□ 0.34
SSR4-207ENST00000471724 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
SSR4-207ENST00000471724 CIAPIN1Q6FI81 312 aa17.2■□□□□ 0.34
SSR4-207ENST00000471724 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
SSR4-207ENST00000471724 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
SSR4-207ENST00000471724 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
SSR4-207ENST00000471724 MYO3BQ8WXR4 1341 aa17.2■□□□□ 0.34
SSR4-207ENST00000471724 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
SSR4-207ENST00000471724 NUCB1Q02818 461 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 STRIP1Q5VSL9 837 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 CHD1LQ86WJ1 897 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 GPC2Q8N158 579 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 ZNF512BQ96KM6 892 aaPredicted RBP17.19■□□□□ 0.34
SSR4-207ENST00000471724 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 MYH7P12883 1935 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
SSR4-207ENST00000471724 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 RAD17O75943 681 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 CXCL9Q07325 125 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
SSR4-207ENST00000471724 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
SSR4-207ENST00000471724 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 RPS12P25398 132 aaKnown RBP17.17■□□□□ 0.34
SSR4-207ENST00000471724 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
SSR4-207ENST00000471724 GTF2IP78347 998 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 WDR66Q8TBY9 1149 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 LNPKQ9C0E8 428 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 IQSEC3Q9UPP2 1182 aaPredicted RBP17.17■□□□□ 0.34
SSR4-207ENST00000471724 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
SSR4-207ENST00000471724 PSMD14O00487 310 aa17.16■□□□□ 0.34
SSR4-207ENST00000471724 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
SSR4-207ENST00000471724 DACT2Q5SW24 774 aa17.16■□□□□ 0.34
SSR4-207ENST00000471724 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
SSR4-207ENST00000471724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSR4-207ENST00000471724 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
SSR4-207ENST00000471724 VIL1P09327 827 aaKnown RBP17.15■□□□□ 0.34
SSR4-207ENST00000471724 MX1P20591 662 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 FSTL1Q12841 308 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 CHAF1AQ13111 956 aaPredicted RBP17.15■□□□□ 0.34
SSR4-207ENST00000471724 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
SSR4-207ENST00000471724 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
SSR4-207ENST00000471724 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 AGBL3Q8NEM8 1001 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
SSR4-207ENST00000471724 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 GJA3Q9Y6H8 435 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
SSR4-207ENST00000471724 ERC2O15083 957 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 MCAMP43121 646 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 AOX1Q06278 1338 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
SSR4-207ENST00000471724 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 ATP5JP18859 108 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
SSR4-207ENST00000471724 MMP14P50281 582 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 SUGT1Q9Y2Z0 365 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 MAST3O60307 1309 aa17.13■□□□□ 0.33
SSR4-207ENST00000471724 GLRX3O76003 335 aaKnown RBP17.12■□□□□ 0.33
SSR4-207ENST00000471724 HSPA6P17066 643 aa17.12■□□□□ 0.33
SSR4-207ENST00000471724 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
SSR4-207ENST00000471724 SCARF1Q14162 830 aa17.12■□□□□ 0.33
SSR4-207ENST00000471724 DPF2Q92785 391 aa17.12■□□□□ 0.33
SSR4-207ENST00000471724 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
SSR4-207ENST00000471724 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
SSR4-207ENST00000471724 POTECB2RU33 542 aa17.11■□□□□ 0.33
SSR4-207ENST00000471724 IGSF3O75054 1194 aa17.11■□□□□ 0.33
SSR4-207ENST00000471724 SPTY2D1Q68D10 685 aaPredicted RBP17.11■□□□□ 0.33
SSR4-207ENST00000471724 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
SSR4-207ENST00000471724 HACL1Q9UJ83 578 aa17.11■□□□□ 0.33
SSR4-207ENST00000471724 SCNN1DP51172 638 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 PDE1AP54750 535 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
SSR4-207ENST00000471724 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 OTUD7AQ8TE49 926 aaPredicted RBP17.1■□□□□ 0.33
SSR4-207ENST00000471724 GMLQ99445 158 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 HAUS7Q99871 368 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
SSR4-207ENST00000471724 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
SSR4-207ENST00000471724 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
SSR4-207ENST00000471724 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
SSR4-207ENST00000471724 ZAP70P43403 619 aa17.09■□□□□ 0.33
SSR4-207ENST00000471724 PI4K2BQ8TCG2 481 aa17.09■□□□□ 0.33
SSR4-207ENST00000471724 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
SSR4-207ENST00000471724 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
SSR4-207ENST00000471724 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
SSR4-207ENST00000471724 H7C1D1 291 aa17.08■□□□□ 0.32
SSR4-207ENST00000471724 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms