RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 HSPD1P10809 573 aaKnown RBP31.07■■■□□ 2.56
U2AF1-208ENST00000471250 PDE6BP35913 854 aa31.07■■■□□ 2.56
U2AF1-208ENST00000471250 TMC4Q7Z404 712 aa31.07■■■□□ 2.56
U2AF1-208ENST00000471250 PUS7LQ9H0K6 701 aaKnown RBP31.07■■■□□ 2.56
U2AF1-208ENST00000471250 WWC3Q9ULE0 1092 aa31.07■■■□□ 2.56
U2AF1-208ENST00000471250 TCRBV5S4A2TA0A5A2 114 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 HIBADHP31937 336 aaKnown RBP31.06■■■□□ 2.56
U2AF1-208ENST00000471250 VPS53Q5VIR6 699 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 IQSEC3Q9UPP2 1182 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-208ENST00000471250 COL1A1P02452 1464 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-208ENST00000471250 SRGNP10124 158 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 ADCK5Q3MIX3 580 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 SLC51AQ86UW1 340 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 ZNF532Q9HCE3 1301 aa31.06■■■□□ 2.56
U2AF1-208ENST00000471250 PDS5AQ29RF7 1337 aaKnown RBP31.05■■■□□ 2.56
U2AF1-208ENST00000471250 NPR1P16066 1061 aa31.05■■■□□ 2.56
U2AF1-208ENST00000471250 GPSM2P81274 684 aa31.05■■■□□ 2.56
U2AF1-208ENST00000471250 C15orf52Q6ZUT6 534 aaKnown RBP31.05■■■□□ 2.56
U2AF1-208ENST00000471250 JAKMIP1Q96N16 626 aaKnown RBP31.05■■■□□ 2.56
U2AF1-208ENST00000471250 ZSWIM6Q9HCJ5 1215 aa31.05■■■□□ 2.56
U2AF1-208ENST00000471250 LRRC37AA6NMS7 1700 aa31.05■■■□□ 2.56
U2AF1-208ENST00000471250 RPAP1Q9BWH6 1393 aaPredicted RBP31.04■■■□□ 2.56
U2AF1-208ENST00000471250 TTC14Q96N46 770 aa31.04■■■□□ 2.56
U2AF1-208ENST00000471250 CASTP20810 708 aaKnown RBP31.03■■■□□ 2.56
U2AF1-208ENST00000471250 ATP2B4P23634 1241 aa31.03■■■□□ 2.56
U2AF1-208ENST00000471250 MYH13Q9UKX3 1938 aa31.03■■■□□ 2.56
U2AF1-208ENST00000471250 GPAA1O43292 621 aa31.03■■■□□ 2.56
U2AF1-208ENST00000471250 PSMA5P28066 241 aa31.03■■■□□ 2.56
U2AF1-208ENST00000471250 TXNRD3Q86VQ6 643 aa31.03■■■□□ 2.56
U2AF1-208ENST00000471250 KRT32Q14532 448 aa31.02■■■□□ 2.56
U2AF1-208ENST00000471250 MAGEB6Q8N7X4 407 aa31.02■■■□□ 2.56
U2AF1-208ENST00000471250 PODXL2Q9NZ53 605 aa31.02■■■□□ 2.56
U2AF1-208ENST00000471250 COL11A2P13942 1736 aaPredicted RBP31.02■■■□□ 2.56
U2AF1-208ENST00000471250 PPEF1O14829 653 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-208ENST00000471250 CCDC125Q86Z20 511 aa31.01■■■□□ 2.55
U2AF1-208ENST00000471250 SP8Q8IXZ3 490 aa31.01■■■□□ 2.55
U2AF1-208ENST00000471250 LRP2BPQ9P2M1 347 aa31.01■■■□□ 2.55
U2AF1-208ENST00000471250 CYP21A2P08686 494 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 NSFL1CQ9UNZ2 370 aaKnown RBP31■■■□□ 2.55
U2AF1-208ENST00000471250 CYP46A1Q9Y6A2 500 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 HSP90AA1P07900 732 aaKnown RBP31■■■□□ 2.55
U2AF1-208ENST00000471250 DDIT3P35638 169 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 RUFY3Q7L099 469 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 MASTLQ96GX5 879 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 GGA1Q9UJY5 639 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 TAF6LQ9Y6J9 622 aa31■■■□□ 2.55
U2AF1-208ENST00000471250 FOXP2O15409 715 aa30.99■■■□□ 2.55
U2AF1-208ENST00000471250 ALDH1B1P30837 517 aa30.99■■■□□ 2.55
U2AF1-208ENST00000471250 FRAT2O75474 233 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-208ENST00000471250 CTNNA3Q9UI47 895 aa30.98■■■□□ 2.55
U2AF1-208ENST00000471250 ATP6V0A2Q9Y487 856 aa30.98■■■□□ 2.55
U2AF1-208ENST00000471250 LTBP1Q14766 1721 aa30.98■■■□□ 2.55
U2AF1-208ENST00000471250 CPA1P15085 419 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 TMX3Q96JJ7 454 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 PDRG1Q9NUG6 133 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 UFL1O94874 794 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 CHMP5Q9NZZ3 219 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 ABCF2Q9UG63 623 aa30.97■■■□□ 2.55
U2AF1-208ENST00000471250 STRBPQ96SI9 672 aaKnown RBP30.96■■■□□ 2.55
U2AF1-208ENST00000471250 AK2P54819 239 aa30.95■■■□□ 2.55
U2AF1-208ENST00000471250 BLOC1S2Q6QNY1 142 aa30.95■■■□□ 2.55
U2AF1-208ENST00000471250 ZNF804AQ7Z570 1209 aa30.95■■■□□ 2.55
U2AF1-208ENST00000471250 AIDAQ96BJ3 306 aa30.95■■■□□ 2.55
U2AF1-208ENST00000471250 TDRD7Q8NHU6 1098 aaKnown RBP30.94■■■□□ 2.54
U2AF1-208ENST00000471250 TBC1D16Q8TBP0 767 aa30.94■■■□□ 2.54
U2AF1-208ENST00000471250 FOXD4L1Q9NU39 408 aa30.94■■■□□ 2.54
U2AF1-208ENST00000471250 RAI14Q9P0K7 980 aa30.94■■■□□ 2.54
U2AF1-208ENST00000471250 CUL4AQ13619 759 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 C2CD5Q86YS7 1000 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 FGAP02671 866 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 RPS6KB1P23443 525 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 CACNA1SQ13698 1873 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 STYK1Q6J9G0 422 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 GPR101Q96P66 508 aaPredicted RBP30.93■■■□□ 2.54
U2AF1-208ENST00000471250 NEK1Q96PY6 1258 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 PDGFDQ9GZP0 370 aaPredicted RBP30.93■■■□□ 2.54
U2AF1-208ENST00000471250 ALDH8A1Q9H2A2 487 aaPredicted RBP30.93■■■□□ 2.54
U2AF1-208ENST00000471250 POLLQ9UGP5 575 aa30.93■■■□□ 2.54
U2AF1-208ENST00000471250 CIZ1Q9ULV3 898 aaPredicted RBP30.93■■■□□ 2.54
U2AF1-208ENST00000471250 CYP7A1P22680 504 aa30.91■■■□□ 2.54
U2AF1-208ENST00000471250 CHAF1AQ13111 956 aaPredicted RBP30.91■■■□□ 2.54
U2AF1-208ENST00000471250 TTLL5Q6EMB2 1281 aa30.91■■■□□ 2.54
U2AF1-208ENST00000471250 NOL8Q76FK4 1167 aaKnown RBP30.91■■■□□ 2.54
U2AF1-208ENST00000471250 SLC16A10Q8TF71 515 aa30.91■■■□□ 2.54
U2AF1-208ENST00000471250 LIMCH1Q9UPQ0 1083 aa30.91■■■□□ 2.54
U2AF1-208ENST00000471250 H0YIN7 160 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 MBD4O95243 580 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 STOX1Q6ZVD7 989 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 A0A0G2JLW4 131 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 IGSF3O75054 1194 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 IMMTQ16891 758 aaKnown RBP30.9■■■□□ 2.54
U2AF1-208ENST00000471250 ZNF622Q969S3 477 aaKnown RBP eCLIP30.9■■■□□ 2.54
U2AF1-208ENST00000471250 SALL1Q9NSC2 1324 aa30.9■■■□□ 2.54
U2AF1-208ENST00000471250 PATL2C9JE40 543 aaKnown RBP30.89■■■□□ 2.54
U2AF1-208ENST00000471250 COL9A3Q14050 684 aaPredicted RBP30.89■■■□□ 2.54
U2AF1-208ENST00000471250 ALX1Q15699 326 aa30.89■■■□□ 2.54
U2AF1-208ENST00000471250 TMED8Q6PL24 325 aaPredicted RBP30.89■■■□□ 2.54
U2AF1-208ENST00000471250 CD209Q9NNX6 404 aa30.89■■■□□ 2.54
U2AF1-208ENST00000471250 LAMA4Q16363 1823 aa30.89■■■□□ 2.53
U2AF1-208ENST00000471250 MAST2Q6P0Q8 1798 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms