RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, human

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GREB1-208	ENST00000470980	RFX7	Q2KHR2	1363 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	PHKA1	P46020	1223 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	KCNJ4	P48050	445 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	GRAP	Q13588	217 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	SCARF1	Q14162	830 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	GRAPL	Q8TC17	118 aa	Predicted RBP	11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	RBM17	Q96I25	401 aa	Known RBP	11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	ANKRD2	Q9GZV1	360 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	IL25	Q9H293	177 aa		11.21	□□□□□ -0.61
GREB1-208	ENST00000470980	RAD50	Q92878	1312 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980		A0A0D9SFI3	127 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	EPB41L2	O43491	1005 aa	Known RBP	11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	NPR1	P16066	1061 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	ZAP70	P43403	619 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	SLC4A3	P48751	1232 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	UBE4A	Q14139	1066 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	TICAM2	Q86XR7	235 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	KIF2C	Q99661	725 aa		11.2	□□□□□ -0.62
GREB1-208	ENST00000470980	ARAP2	Q8WZ64	1704 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	ARID4A	P29374	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	MCAM	P43121	646 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	RABEP1	Q15276	862 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	CRY2	Q49AN0	593 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	PI16	Q6UXB8	463 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	LSG1	Q9H089	658 aa	Known RBP	11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	ANTXR1	Q9H6X2	564 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	GNL3L	Q9NVN8	582 aa	Known RBP	11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	TAF1	P21675	1872 aa		11.19	□□□□□ -0.62
GREB1-208	ENST00000470980	CCDC171	Q6TFL3	1326 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	RNF113A	O15541	343 aa	Known RBP	11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	BCAM	P50895	628 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	TTF1	Q15361	905 aa	Predicted RBP	11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	CCDC93	Q567U6	631 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	CAVIN4	Q5BKX8	364 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	VPS37D	Q86XT2	251 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	HSCB	Q8IWL3	235 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	SPATA5	Q8NB90	893 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	TBC1D2	Q9BYX2	928 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	HMG20B	Q9P0W2	317 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	ANKIB1	Q9P2G1	1089 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	SCN4A	P35499	1836 aa		11.18	□□□□□ -0.62
GREB1-208	ENST00000470980	PASK	Q96RG2	1323 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	WTIP	A6NIX2	430 aa	Predicted RBP	11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	BBOX1	O75936	387 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	DDN	O94850	711 aa	Predicted RBP	11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	ZFY	P08048	801 aa	Predicted RBP	11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	HOXA10	P31260	410 aa	Predicted RBP	11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	HSPA4	P34932	840 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	GYG1	P46976	350 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	ANAPC15	P60006	121 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	PTH1R	Q03431	593 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	RASGRF1	Q13972	1273 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	MCMDC2	Q4G0Z9	681 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	ZMYM1	Q5SVZ6	1142 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	ZSCAN25	Q6NSZ9	544 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	CHADL	Q6NUI6	762 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	CRAMP1	Q96RY5	1269 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	HELLS	Q9NRZ9	838 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	ADAMTSL1	Q8N6G6	1762 aa		11.17	□□□□□ -0.62
GREB1-208	ENST00000470980	MED23	Q9ULK4	1368 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	ZNF804B	A4D1E1	1349 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	IQCA1L	A6NCM1	817 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	FZD9	O00144	591 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	IDH1	O75874	414 aa	Known RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	CHGB	P05060	677 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	CYP2E1	P05181	493 aa	Predicted RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	ALDH1B1	P30837	517 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	WASHC4	Q2M389	1173 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	CCDC129	Q6ZRS4	1044 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	RTKN2	Q8IZC4	609 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	SNX21	Q969T3	373 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	SEC62	Q99442	399 aa	Known RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	PSMD1	Q99460	953 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	PIH1D3	Q9NQM4	214 aa	Known RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	CREBZF	Q9NS37	354 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	PALD1	Q9ULE6	856 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	CACNA1S	Q13698	1873 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980		A0A1B0GUL6	1792 aa		11.16	□□□□□ -0.62
GREB1-208	ENST00000470980	XDH	P47989	1333 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	POTEI	P0CG38	1075 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	POTEJ	P0CG39	1038 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	SLFNL1	Q499Z3	407 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	CC2D2B	Q6DHV5	1058 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	TMC4	Q7Z404	712 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	MAP4K1	Q92918	833 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	FAM84B	Q96KN1	310 aa	Predicted RBP	11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	LEMD3	Q9Y2U8	911 aa		11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	RBM8A	Q9Y5S9	174 aa	Known RBP	11.15	□□□□□ -0.62
GREB1-208	ENST00000470980	MAST3	O60307	1309 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980		M0R2C6	588 aa		11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	PPEF1	O14829	653 aa	Predicted RBP	11.14	□□□□□ -0.63
GREB1-208	ENST00000470980	ST18	O60284	1047 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms