RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 AFDNP55196 1824 aaKnown RBP6.9□□□□□ -1.3
UBE4B-207ENST00000470736 H0YIN7 160 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 H3BM21 787 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 PLIN1O60240 522 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 TM4SF1P30408 202 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 TGFB2P61812 414 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 SLFN5Q08AF3 891 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 DALRD3Q5D0E6 543 aaKnown RBP6.9□□□□□ -1.3
UBE4B-207ENST00000470736 C20orf194Q5TEA3 1177 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 ZNF622Q969S3 477 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBE4B-207ENST00000470736 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 CHPF2Q9P2E5 772 aa6.9□□□□□ -1.3
UBE4B-207ENST00000470736 PXDNLA1KZ92 1463 aa6.9□□□□□ -1.31
UBE4B-207ENST00000470736 PDE6BP35913 854 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 HLFQ16534 295 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 PTPRNQ16849 979 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 PROSER3Q2NL68 480 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-207ENST00000470736 COPS6Q7L5N1 327 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-207ENST00000470736 XAGE3Q8WTP9 111 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 STK31Q9BXU1 1019 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 FAM217BQ9NTX9 383 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-207ENST00000470736 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 MAP3K15Q6ZN16 1313 aa6.89□□□□□ -1.31
UBE4B-207ENST00000470736 CHD4Q14839 1912 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 SPDYE5A6NIY4 337 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 DESI1Q6ICB0 168 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 PRR5LQ6MZQ0 368 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 RIC3Q7Z5B4 369 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-207ENST00000470736 NYXQ9GZU5 481 aa6.88□□□□□ -1.31
UBE4B-207ENST00000470736 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBE4B-207ENST00000470736 DBF4Q9UBU7 674 aaPredicted RBP6.88□□□□□ -1.31
UBE4B-207ENST00000470736 CACNA1SQ13698 1873 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 NUP98P52948 1817 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 ERVV-1B6SEH8 477 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 HOXB7P09629 217 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 FDX1P10109 184 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
UBE4B-207ENST00000470736 CCDC27Q2M243 656 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 TWISTNBQ3B726 338 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-207ENST00000470736 HSP90AB3PQ58FF7 597 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 CCDC30Q5VVM6 783 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 PPP1R42Q7Z4L9 355 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 SKAP1Q86WV1 359 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 TTLL6Q8N841 843 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 C8orf58Q8NAV2 365 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 RPGRQ92834 1020 aaKnown RBP6.87□□□□□ -1.31
UBE4B-207ENST00000470736 CHMP4AQ9BY43 222 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 MYH16Q9H6N6 1097 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 EVA1BQ9NVM1 165 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 HYPKQ9NX55 129 aa6.87□□□□□ -1.31
UBE4B-207ENST00000470736 ATP5J2-PTCD1G3V325 749 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 DDX58O95786 925 aaKnown RBP6.86□□□□□ -1.31
UBE4B-207ENST00000470736 ZNF853P0CG23 659 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 GMPRP36959 345 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 SH3BP2P78314 561 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
UBE4B-207ENST00000470736 WDR63Q8IWG1 891 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 TSPYL6Q8N831 410 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 KRI1Q8N9T8 703 aaKnown RBP6.86□□□□□ -1.31
UBE4B-207ENST00000470736 HLA-CQ95604 372 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 CCDC102AQ96A19 550 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
UBE4B-207ENST00000470736 BRIP1Q9BX63 1249 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 TRMT112Q9UI30 125 aaKnown RBP6.86□□□□□ -1.31
UBE4B-207ENST00000470736 KIAA1551Q9HCM1 1747 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 NRXN2Q9P2S2 1712 aa6.86□□□□□ -1.31
UBE4B-207ENST00000470736 ANKRD31Q8N7Z5 1873 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 IL16Q14005 1332 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 E9PSI1 815 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 C21orf2O43822 256 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 GJA5P36382 358 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 EXOSC9Q06265 439 aaKnown RBP6.85□□□□□ -1.31
UBE4B-207ENST00000470736 SCARF1Q14162 830 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 PARP10Q53GL7 1025 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 SUSD4Q5VX71 490 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 PTCRAQ6ISU1 281 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-207ENST00000470736 PLBD2Q8NHP8 589 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 CNKSR1Q969H4 720 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 MYD88Q99836 296 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 TMX4Q9H1E5 349 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-207ENST00000470736 PHAXQ9H814 394 aaKnown RBP6.85□□□□□ -1.31
UBE4B-207ENST00000470736 ANKRD36CQ5JPF3 1778 aa6.85□□□□□ -1.31
UBE4B-207ENST00000470736 ATP10DQ9P241 1426 aa6.84□□□□□ -1.31
UBE4B-207ENST00000470736 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-207ENST00000470736 UBN2Q6ZU65 1347 aa6.84□□□□□ -1.31
UBE4B-207ENST00000470736 BRCA1P38398 1863 aaKnown RBP6.84□□□□□ -1.31
UBE4B-207ENST00000470736 C6orf229H3BNL8 230 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms