RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 BSNDQ8WZ55 320 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 ASB16Q96NS5 453 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 HHIPQ96QV1 700 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 CSRNP1Q96S65 589 aa7.41□□□□□ -1.22
COL9A1-206ENST00000470652 BHLHE41Q9C0J9 482 aaPredicted RBP7.41□□□□□ -1.22
COL9A1-206ENST00000470652 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
COL9A1-206ENST00000470652 A0A1W2PP55 124 aa7.4□□□□□ -1.22
COL9A1-206ENST00000470652 EPHA1P21709 976 aa7.4□□□□□ -1.22
COL9A1-206ENST00000470652 DSC3Q14574 896 aa7.4□□□□□ -1.22
COL9A1-206ENST00000470652 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
COL9A1-206ENST00000470652 WNT8BQ93098 351 aa7.4□□□□□ -1.22
COL9A1-206ENST00000470652 CCDC74AQ96AQ1 378 aa7.4□□□□□ -1.22
COL9A1-206ENST00000470652 H3BRJ5 948 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 CDC25BP30305 580 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 TXNDC11Q6PKC3 985 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 ASAP3Q8TDY4 903 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 LIN7BQ9HAP6 207 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 GOLGA2P5Q9HBQ8 144 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 SOX13Q9UN79 622 aa7.39□□□□□ -1.23
COL9A1-206ENST00000470652 BTBD11A6QL63 1104 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 FSCN2O14926 492 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 PIP4K2BP78356 416 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 CCNJLQ8IV13 435 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 NPHS2Q9NP85 383 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 OSGEPQ9NPF4 335 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 SEC31BQ9NQW1 1179 aa7.38□□□□□ -1.23
COL9A1-206ENST00000470652 CD68P34810 354 aaPredicted RBP7.37□□□□□ -1.23
COL9A1-206ENST00000470652 ARL4DP49703 201 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 ENOX2Q16206 610 aaKnown RBP7.37□□□□□ -1.23
COL9A1-206ENST00000470652 PRR23CQ6ZRP0 262 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 VN1R5Q7Z5H4 357 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 GALNT11Q8NCW6 608 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 TCF12Q99081 682 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
COL9A1-206ENST00000470652 EHD4Q9H223 541 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 PCMTD2Q9NV79 361 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
COL9A1-206ENST00000470652 A0A096LPE4 126 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 A0A1W2PPZ6 126 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 IKBKEQ14164 716 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 TMEM130Q8N3G9 435 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 CARD10Q9BWT7 1032 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 KRTAP9-9Q9BYP9 154 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 KRTAP9-4Q9BYQ2 154 aa7.36□□□□□ -1.23
COL9A1-206ENST00000470652 PNMA6FA0A0J9YX94 578 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 METTL12A8MUP2 240 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
COL9A1-206ENST00000470652 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
COL9A1-206ENST00000470652 MAPK8P45983 427 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 FMR1Q06787 632 aaKnown RBP eCLIP7.35□□□□□ -1.23
COL9A1-206ENST00000470652 MCTP1Q6DN14 999 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 EPS8L3Q8TE67 593 aaKnown RBP7.35□□□□□ -1.23
COL9A1-206ENST00000470652 SLC7A3Q8WY07 619 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 PPP4R2Q9NY27 417 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
COL9A1-206ENST00000470652 TM4SF5O14894 197 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 ALX3O95076 343 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 SSTR4P31391 388 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 GRIA4P48058 902 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 C19orf57Q0VDD7 668 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 KLHDC7BQ96G42 594 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 CLEC4MQ9H2X3 399 aaPredicted RBP7.34□□□□□ -1.23
COL9A1-206ENST00000470652 SOX17Q9H6I2 414 aaPredicted RBP7.34□□□□□ -1.23
COL9A1-206ENST00000470652 AKTIPQ9H8T0 292 aa7.34□□□□□ -1.23
COL9A1-206ENST00000470652 SOX1O00570 391 aaPredicted RBP7.33□□□□□ -1.24
COL9A1-206ENST00000470652 PTPN12Q05209 780 aaKnown RBP7.33□□□□□ -1.24
COL9A1-206ENST00000470652 PRPF40BQ6NWY9 871 aaKnown RBP7.33□□□□□ -1.24
COL9A1-206ENST00000470652 FBF1Q8TES7 1133 aa7.33□□□□□ -1.24
COL9A1-206ENST00000470652 GZF1Q9H116 711 aaPredicted RBP7.33□□□□□ -1.24
COL9A1-206ENST00000470652 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
COL9A1-206ENST00000470652 ESRRAP11474 423 aaPredicted RBP7.32□□□□□ -1.24
COL9A1-206ENST00000470652 FSTP19883 344 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 ITPKAP23677 461 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 ATP2B2Q01814 1243 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 GRM2Q14416 872 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 COL19A1Q14993 1142 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 SPRED3Q2MJR0 410 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL9A1-206ENST00000470652 ALG1LQ6GMV1 187 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 SLC51AQ86UW1 340 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 DZIP1LQ8IYY4 767 aaKnown RBP7.32□□□□□ -1.24
COL9A1-206ENST00000470652 ZFYVE1Q9HBF4 777 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
COL9A1-206ENST00000470652 TMEM238LA0A1B0GVL6 79 aa7.31□□□□□ -1.24
COL9A1-206ENST00000470652 ANKRD33BA6NCL7 494 aa7.31□□□□□ -1.24
COL9A1-206ENST00000470652 DDX3YO15523 660 aaKnown RBP7.31□□□□□ -1.24
COL9A1-206ENST00000470652 PCDH1Q08174 1060 aa7.31□□□□□ -1.24
COL9A1-206ENST00000470652 DUOXA2Q1HG44 320 aa7.31□□□□□ -1.24
COL9A1-206ENST00000470652 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.31□□□□□ -1.24
COL9A1-206ENST00000470652 ABCB6Q9NP58 842 aa7.31□□□□□ -1.24
COL9A1-206ENST00000470652 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
COL9A1-206ENST00000470652 PAX4O43316 350 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 ADAM11O75078 769 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 ACAD11Q709F0 780 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 GLIS3Q8NEA6 775 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms