RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
CDHR3-207ENST00000470188 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.6■■□□□ 1.37
CDHR3-207ENST00000470188 TTC12Q9H892 705 aaPredicted RBP23.6■■□□□ 1.37
CDHR3-207ENST00000470188 HAND2P61296 217 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 ZNF710Q8N1W2 664 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 CHMP4CQ96CF2 233 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 NCOA5Q9HCD5 579 aaKnown RBP23.59■■□□□ 1.37
CDHR3-207ENST00000470188 DACT1Q9NYF0 836 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 FGAP02671 866 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 FBXL16Q8N461 479 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 VGLL2Q8N8G2 317 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 CFAP45Q9UL16 551 aa23.59■■□□□ 1.37
CDHR3-207ENST00000470188 DMTNQ08495 405 aa23.58■■□□□ 1.37
CDHR3-207ENST00000470188 ZNF512BQ96KM6 892 aaPredicted RBP23.58■■□□□ 1.37
CDHR3-207ENST00000470188 SALL1Q9NSC2 1324 aa23.58■■□□□ 1.37
CDHR3-207ENST00000470188 GPAA1O43292 621 aa23.58■■□□□ 1.36
CDHR3-207ENST00000470188 CAMK4Q16566 473 aa23.58■■□□□ 1.36
CDHR3-207ENST00000470188 ZSCAN25Q6NSZ9 544 aa23.58■■□□□ 1.36
CDHR3-207ENST00000470188 DDX19AQ9NUU7 478 aaKnown RBP23.58■■□□□ 1.36
CDHR3-207ENST00000470188 COL16A1Q07092 1604 aaPredicted RBP23.58■■□□□ 1.36
CDHR3-207ENST00000470188 UBN2Q6ZU65 1347 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 KAT6BQ8WYB5 2073 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 PDE8BO95263 885 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 FOSBP53539 338 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 PGBD1Q96JS3 809 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 ARID3AQ99856 593 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 TNMDQ9H2S6 317 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 MYH3P11055 1940 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 NWD2Q9ULI1 1742 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 ZNF34Q8IZ26 560 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 BICD2Q8TD16 824 aa23.57■■□□□ 1.36
CDHR3-207ENST00000470188 EVCP57679 992 aa23.56■■□□□ 1.36
CDHR3-207ENST00000470188 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
CDHR3-207ENST00000470188 NUP98P52948 1817 aa23.56■■□□□ 1.36
CDHR3-207ENST00000470188 UBAP1LF5GYI3 381 aa23.55■■□□□ 1.36
CDHR3-207ENST00000470188 ADD2P35612 726 aa23.55■■□□□ 1.36
CDHR3-207ENST00000470188 COL22A1Q8NFW1 1626 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-207ENST00000470188 ZNF213O14771 459 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 PRC1O43663 620 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 CHAF1AQ13111 956 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-207ENST00000470188 SLC9C2Q5TAH2 1124 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 MB21D2Q8IYB1 491 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-207ENST00000470188 KIAA1524Q8TCG1 905 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 CLSTN2Q9H4D0 955 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 GPHNQ9NQX3 736 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-207ENST00000470188 GOLGA6L6A8MZA4 724 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 ZSCAN20P17040 1043 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-207ENST00000470188 TYRO3Q06418 890 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 MPNDQ8N594 471 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 NCOA7Q8NI08 942 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
CDHR3-207ENST00000470188 MYH7P12883 1935 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 WNK3Q9BYP7 1800 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 NR1I2O75469 434 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 ADD1P35611 737 aaKnown RBP23.53■■□□□ 1.36
CDHR3-207ENST00000470188 CCDC102BQ68D86 513 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 RALYLQ86SE5 291 aaKnown RBP23.53■■□□□ 1.36
CDHR3-207ENST00000470188 CKAP2LQ8IYA6 745 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 PIH1D3Q9NQM4 214 aaKnown RBP23.53■■□□□ 1.36
CDHR3-207ENST00000470188 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 CARMIL3Q8ND23 1372 aa23.53■■□□□ 1.36
CDHR3-207ENST00000470188 PPFIA3O75145 1194 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 PHKA1P46020 1223 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 CEBPZQ03701 1054 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 PUM3Q15397 648 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 CDCA7Q9BWT1 371 aaPredicted RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 GTPBP4Q9BZE4 634 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 MRVI1Q9Y6F6 885 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 IDH1O75874 414 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 ATRNO75882 1429 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 UQCRFS1P1P0C7P4 283 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 ARID4AP29374 1257 aaPredicted RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 PLCB2Q00722 1185 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 RBM43Q6ZSC3 357 aaKnown RBP23.52■■□□□ 1.36
CDHR3-207ENST00000470188 FAM200AQ8TCP9 573 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 AK7Q96M32 723 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 MROH5Q6ZUA9 1318 aa23.52■■□□□ 1.36
CDHR3-207ENST00000470188 UBE3CQ15386 1083 aa23.51■■□□□ 1.35
CDHR3-207ENST00000470188 A0A0G2JS52 829 aa23.51■■□□□ 1.35
CDHR3-207ENST00000470188 C17orf53Q8N3J3 647 aaPredicted RBP23.51■■□□□ 1.35
CDHR3-207ENST00000470188 LPIN2Q92539 896 aa23.51■■□□□ 1.35
CDHR3-207ENST00000470188 BCL2L12Q9HB09 334 aa23.51■■□□□ 1.35
CDHR3-207ENST00000470188 LRP5O75197 1615 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 KLF18A0A0U1RQI7 1052 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 ANTXR2P58335 489 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 GUCY1B3Q02153 619 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 ATL3Q6DD88 541 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 INTS5Q6P9B9 1019 aaKnown RBP23.5■■□□□ 1.35
CDHR3-207ENST00000470188 ZNF396Q96N95 335 aaPredicted RBP23.5■■□□□ 1.35
CDHR3-207ENST00000470188 PRDM10Q9NQV6 1147 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 CCDC87Q9NVE4 849 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 RCOR1Q9UKL0 485 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 SLIT2O94813 1529 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 GOLGA8BA8MQT2 603 aa23.5■■□□□ 1.35
CDHR3-207ENST00000470188 DHX16O60231 1041 aaKnown RBP23.5■■□□□ 1.35
CDHR3-207ENST00000470188 FDPSP14324 419 aaKnown RBP23.5■■□□□ 1.35
CDHR3-207ENST00000470188 DDB1Q16531 1140 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms