RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 C19orf57Q0VDD7 668 aa10.4□□□□□ -0.74
COL11A1-208ENST00000470170 CEP41Q9BYV8 373 aa10.4□□□□□ -0.74
COL11A1-208ENST00000470170 ARL4DP49703 201 aa10.39□□□□□ -0.75
COL11A1-208ENST00000470170 ORC1Q13415 861 aa10.39□□□□□ -0.75
COL11A1-208ENST00000470170 GALNT12Q8IXK2 581 aa10.39□□□□□ -0.75
COL11A1-208ENST00000470170 ARMC10Q8N2F6 343 aa10.39□□□□□ -0.75
COL11A1-208ENST00000470170 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
COL11A1-208ENST00000470170 A0A1W2PP55 124 aa10.38□□□□□ -0.75
COL11A1-208ENST00000470170 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
COL11A1-208ENST00000470170 FSTP19883 344 aa10.37□□□□□ -0.75
COL11A1-208ENST00000470170 PDE3BQ13370 1112 aa10.37□□□□□ -0.75
COL11A1-208ENST00000470170 UTP4Q969X6 686 aaKnown RBP10.37□□□□□ -0.75
COL11A1-208ENST00000470170 RAXQ9Y2V3 346 aa10.37□□□□□ -0.75
COL11A1-208ENST00000470170 ESRRAP11474 423 aaPredicted RBP10.36□□□□□ -0.75
COL11A1-208ENST00000470170 FAM46AQ96IP4 442 aaKnown RBP10.36□□□□□ -0.75
COL11A1-208ENST00000470170 RUSC1Q9BVN2 902 aa10.36□□□□□ -0.75
COL11A1-208ENST00000470170 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
COL11A1-208ENST00000470170 LIN7BQ9HAP6 207 aa10.36□□□□□ -0.75
COL11A1-208ENST00000470170 GPR182O15218 404 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 DHX15O43143 795 aaKnown RBP10.35□□□□□ -0.75
COL11A1-208ENST00000470170 ARTNQ5T4W7 220 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 CCNJLQ8IV13 435 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 TCF12Q99081 682 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 USP26Q9BXU7 913 aa10.35□□□□□ -0.75
COL11A1-208ENST00000470170 SOWAHDA6NJG2 315 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 IGHA2P01877 340 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 NEFLP07196 543 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 GRIA4P48058 902 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 PREPP48147 710 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 SPRED3Q2MJR0 410 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 NPHS2Q9NP85 383 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 STOML1Q9UBI4 398 aa10.34□□□□□ -0.75
COL11A1-208ENST00000470170 A0A096LPE4 126 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 A0A1W2PPZ6 126 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 CPNE3O75131 537 aaKnown RBP10.33□□□□□ -0.76
COL11A1-208ENST00000470170 ANKRD34AQ69YU3 496 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 NIF3L1Q9GZT8 377 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 SOX17Q9H6I2 414 aaPredicted RBP10.33□□□□□ -0.76
COL11A1-208ENST00000470170 ZFP64Q9NPA5 681 aa10.33□□□□□ -0.76
COL11A1-208ENST00000470170 SART1O43290 800 aaKnown RBP10.32□□□□□ -0.76
COL11A1-208ENST00000470170 GSTM4Q03013 218 aa10.32□□□□□ -0.76
COL11A1-208ENST00000470170 FDX2Q6P4F2 183 aa10.32□□□□□ -0.76
COL11A1-208ENST00000470170 LOC100289279A0A1B0GTE1 492 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 DLGAP3O95886 979 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 PCDH1Q08174 1060 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 LRP8Q14114 963 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 KIAA0319Q5VV43 1072 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 EHD4Q9H223 541 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 RNF112Q9ULX5 631 aa10.31□□□□□ -0.76
COL11A1-208ENST00000470170 EIF1AYO14602 144 aaKnown RBP10.3□□□□□ -0.76
COL11A1-208ENST00000470170 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-208ENST00000470170 CLEC4MQ9H2X3 399 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-208ENST00000470170 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-208ENST00000470170 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
COL11A1-208ENST00000470170 HMX2A2RU54 273 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 MEGF11A6BM72 1044 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 BRD1O95696 1058 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 ZNF423Q2M1K9 1284 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 TRIM42Q8IWZ5 723 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 FAM20CQ8IXL6 584 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 CCDC74AQ96AQ1 378 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 TMPRSS13Q9BYE2 586 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 RBCK1Q9BYM8 510 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
COL11A1-208ENST00000470170 HYAL3O43820 417 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-208ENST00000470170 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
COL11A1-208ENST00000470170 BMP3P12645 472 aa10.28□□□□□ -0.76
COL11A1-208ENST00000470170 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
COL11A1-208ENST00000470170 DMRTB1Q96MA1 342 aa10.28□□□□□ -0.76
COL11A1-208ENST00000470170 KCNF1Q9H3M0 494 aa10.28□□□□□ -0.76
COL11A1-208ENST00000470170 SLC51AQ86UW1 340 aa10.27□□□□□ -0.77
COL11A1-208ENST00000470170 NRSN2Q9GZP1 204 aa10.27□□□□□ -0.77
COL11A1-208ENST00000470170 DNAJC25Q9H1X3 360 aa10.27□□□□□ -0.77
COL11A1-208ENST00000470170 GSC2O15499 205 aa10.26□□□□□ -0.77
COL11A1-208ENST00000470170 GAS2O43903 313 aaKnown RBP10.26□□□□□ -0.77
COL11A1-208ENST00000470170 NFIAQ12857 509 aa10.26□□□□□ -0.77
COL11A1-208ENST00000470170 TMC7Q7Z402 723 aa10.26□□□□□ -0.77
COL11A1-208ENST00000470170 C12orf50Q8NA57 414 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-208ENST00000470170 ALKBH8Q96BT7 664 aaKnown RBP10.26□□□□□ -0.77
COL11A1-208ENST00000470170 CSRNP1Q96S65 589 aa10.26□□□□□ -0.77
COL11A1-208ENST00000470170 ZNF576Q9H609 170 aa10.26□□□□□ -0.77
COL11A1-208ENST00000470170 GADD45BO75293 160 aaPredicted RBP10.25□□□□□ -0.77
COL11A1-208ENST00000470170 BEND4Q6ZU67 534 aa10.25□□□□□ -0.77
COL11A1-208ENST00000470170 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
COL11A1-208ENST00000470170 CYP4F12Q9HCS2 524 aa10.25□□□□□ -0.77
COL11A1-208ENST00000470170 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
COL11A1-208ENST00000470170 TIAF1O95411 115 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 CTSBP07858 339 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 SGO2Q562F6 1265 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 EXOSC6Q5RKV6 272 aaKnown RBP10.24□□□□□ -0.77
COL11A1-208ENST00000470170 CLEC10AQ8IUN9 316 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 SMG8Q8ND04 991 aaKnown RBP10.24□□□□□ -0.77
COL11A1-208ENST00000470170 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
COL11A1-208ENST00000470170 FAM83CQ9BQN1 747 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 DCTN4Q9UJW0 460 aa10.24□□□□□ -0.77
COL11A1-208ENST00000470170 HIF3AQ9Y2N7 669 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms