RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NUP188Q5SRE5 1749 aa12.02□□□□□ -0.49
SMC4-210ENST00000469762 BECN2A8MW95 431 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 PHKG2P15735 406 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 GABPB1Q06547 395 aaPredicted RBP12.01□□□□□ -0.49
SMC4-210ENST00000469762 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 FBXL16Q8N461 479 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 HELLSQ9NRZ9 838 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 A0A087WZG4 1122 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 TERF2Q15554 542 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
SMC4-210ENST00000469762 ERO1AQ96HE7 468 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 A0A1W2PQ27 194 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 A0A1W2PQ64 194 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 A0A1W2PQD8 194 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
SMC4-210ENST00000469762 BPIFA3Q9BQP9 254 aa12.01□□□□□ -0.49
SMC4-210ENST00000469762 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
SMC4-210ENST00000469762 CEP57L1Q8IYX8 460 aa12□□□□□ -0.49
SMC4-210ENST00000469762 OSBP2Q969R2 916 aa12□□□□□ -0.49
SMC4-210ENST00000469762 ZNF396Q96N95 335 aaPredicted RBP12□□□□□ -0.49
SMC4-210ENST00000469762 IFNKQ9P0W0 207 aa12□□□□□ -0.49
SMC4-210ENST00000469762 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
SMC4-210ENST00000469762 COL18A1P39060 1754 aa12□□□□□ -0.49
SMC4-210ENST00000469762 LRRC24Q50LG9 513 aa12□□□□□ -0.49
SMC4-210ENST00000469762 IMPACTQ9P2X3 320 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 H7C1W4 665 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
SMC4-210ENST00000469762 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
SMC4-210ENST00000469762 POLR3DP05423 398 aaPredicted RBP11.99□□□□□ -0.49
SMC4-210ENST00000469762 FGD1P98174 961 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 ANTXR2P58335 489 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
SMC4-210ENST00000469762 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
SMC4-210ENST00000469762 ATP1A3P13637 1013 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 DPF2Q92785 391 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 POLR3EQ9NVU0 708 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 ALS2Q96Q42 1657 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 BIN1O00499 593 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 CYP27B1O15528 508 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 SYT10Q6XYQ8 523 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 ZNF594Q96JF6 807 aaPredicted RBP11.98□□□□□ -0.49
SMC4-210ENST00000469762 DENND2AQ9ULE3 1009 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 FHOD1Q9Y613 1164 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 GSDMDP57764 484 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 TRIM65Q6PJ69 517 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 KRT222Q8N1A0 295 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 FBXO18Q8NFZ0 1043 aa11.98□□□□□ -0.49
SMC4-210ENST00000469762 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
SMC4-210ENST00000469762 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 SDF4Q9BRK5 362 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
SMC4-210ENST00000469762 NPHP1O15259 732 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 ZNF202O95125 648 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
SMC4-210ENST00000469762 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
SMC4-210ENST00000469762 KCNJ6P48051 423 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
SMC4-210ENST00000469762 TMX1Q9H3N1 280 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
SMC4-210ENST00000469762 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 YEATS4O95619 227 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 PFKFB1P16118 471 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 NLRP12P59046 1061 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.49
SMC4-210ENST00000469762 HAND2P61296 217 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
SMC4-210ENST00000469762 NAP1L2Q9ULW6 460 aaPredicted RBP11.96□□□□□ -0.49
SMC4-210ENST00000469762 SPTLC2O15270 562 aa11.96□□□□□ -0.5
SMC4-210ENST00000469762 SCARF1Q14162 830 aa11.96□□□□□ -0.5
SMC4-210ENST00000469762 ZNF771Q7L3S4 317 aaPredicted RBP11.96□□□□□ -0.5
SMC4-210ENST00000469762 MYO5AQ9Y4I1 1855 aaKnown RBP11.95□□□□□ -0.5
SMC4-210ENST00000469762 CLCN6P51797 869 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 KIF23Q02241 960 aaPredicted RBP11.95□□□□□ -0.5
SMC4-210ENST00000469762 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 TMEM139Q8IV31 216 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 NAT10Q9H0A0 1025 aaKnown RBP11.95□□□□□ -0.5
SMC4-210ENST00000469762 MST1RQ04912 1400 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 GOLGA8FQ08AF8 430 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 GOLGA8DPQ0D2H9 430 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
SMC4-210ENST00000469762 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
SMC4-210ENST00000469762 HPSEQ9Y251 543 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms