RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
LMNA-210ENST00000469565 C15orf52Q6ZUT6 534 aaKnown RBP16.75■□□□□ 0.27
LMNA-210ENST00000469565 COA1Q9GZY4 146 aa16.75■□□□□ 0.27
LMNA-210ENST00000469565 CD209Q9NNX6 404 aa16.75■□□□□ 0.27
LMNA-210ENST00000469565 WBP1LQ9NX94 342 aa16.75■□□□□ 0.27
LMNA-210ENST00000469565 IQSEC3Q9UPP2 1182 aaPredicted RBP16.75■□□□□ 0.27
LMNA-210ENST00000469565 ZNF609O15014 1411 aa16.75■□□□□ 0.27
LMNA-210ENST00000469565 EIF6P56537 245 aaKnown RBP16.74■□□□□ 0.27
LMNA-210ENST00000469565 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
LMNA-210ENST00000469565 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 ZNRF3Q9ULT6 936 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 SCN4AP35499 1836 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 COL4A5P29400 1685 aa16.74■□□□□ 0.27
LMNA-210ENST00000469565 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 IRS2Q9Y4H2 1338 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 RAD17O75943 681 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 ITGBL1O95965 494 aaPredicted RBP16.73■□□□□ 0.27
LMNA-210ENST00000469565 PHKA1P46020 1223 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 TTC39AQ5SRH9 613 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 L3MBTL3Q96JM7 780 aaPredicted RBP16.73■□□□□ 0.27
LMNA-210ENST00000469565 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
LMNA-210ENST00000469565 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
LMNA-210ENST00000469565 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
LMNA-210ENST00000469565 YDJCA8MPS7 323 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 CCDC102BQ68D86 513 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 LNPKQ9C0E8 428 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
LMNA-210ENST00000469565 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 GJA3Q9Y6H8 435 aa16.72■□□□□ 0.27
LMNA-210ENST00000469565 FZD9O00144 591 aa16.71■□□□□ 0.27
LMNA-210ENST00000469565 GTF2IP78347 998 aa16.71■□□□□ 0.27
LMNA-210ENST00000469565 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
LMNA-210ENST00000469565 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
LMNA-210ENST00000469565 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
LMNA-210ENST00000469565 CIAPIN1Q6FI81 312 aa16.71■□□□□ 0.27
LMNA-210ENST00000469565 IL1R1P14778 569 aa16.7■□□□□ 0.26
LMNA-210ENST00000469565 MAP2K1Q02750 393 aaPredicted RBP16.7■□□□□ 0.26
LMNA-210ENST00000469565 CXCL9Q07325 125 aa16.7■□□□□ 0.26
LMNA-210ENST00000469565 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
LMNA-210ENST00000469565 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
LMNA-210ENST00000469565 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
LMNA-210ENST00000469565 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 PSMD14O00487 310 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 HSPA8P11142 646 aaKnown RBP16.69■□□□□ 0.26
LMNA-210ENST00000469565 NUCB1Q02818 461 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 TNIP1Q15025 636 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
LMNA-210ENST00000469565 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
LMNA-210ENST00000469565 PSME4Q14997 1843 aa16.68■□□□□ 0.26
LMNA-210ENST00000469565 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
LMNA-210ENST00000469565 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
LMNA-210ENST00000469565 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
LMNA-210ENST00000469565 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
LMNA-210ENST00000469565 EPHX2P34913 555 aa16.67■□□□□ 0.26
LMNA-210ENST00000469565 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
LMNA-210ENST00000469565 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
LMNA-210ENST00000469565 GPATCH3Q96I76 525 aa16.67■□□□□ 0.26
LMNA-210ENST00000469565 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
LMNA-210ENST00000469565 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
LMNA-210ENST00000469565 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
LMNA-210ENST00000469565 MLLT1Q03111 559 aaPredicted RBP16.66■□□□□ 0.26
LMNA-210ENST00000469565 RASGRF1Q13972 1273 aa16.66■□□□□ 0.26
LMNA-210ENST00000469565 STRIP1Q5VSL9 837 aa16.66■□□□□ 0.26
LMNA-210ENST00000469565 PCDH10Q9P2E7 1040 aa16.66■□□□□ 0.26
LMNA-210ENST00000469565 ABT1Q9ULW3 272 aaKnown RBP16.66■□□□□ 0.26
LMNA-210ENST00000469565 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
LMNA-210ENST00000469565 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
LMNA-210ENST00000469565 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 SEMA3EO15041 775 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
LMNA-210ENST00000469565 MCAMP43121 646 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 SCARF1Q14162 830 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
LMNA-210ENST00000469565 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
LMNA-210ENST00000469565 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
LMNA-210ENST00000469565 MX1P20591 662 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 MFSD14BQ5SR56 506 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
LMNA-210ENST00000469565 GPC2Q8N158 579 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 SPATA5Q8NB90 893 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
LMNA-210ENST00000469565 BEGAINQ9BUH8 593 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.25
LMNA-210ENST00000469565 MYO5AQ9Y4I1 1855 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms