RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 WWC3Q9ULE0 1092 aa20.92■□□□□ 0.94
MCF2L-221ENST00000469415 UBE2Q2LH0YL09 131 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 CIAO1O76071 339 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 FDPSP14324 419 aaKnown RBP20.91■□□□□ 0.94
MCF2L-221ENST00000469415 LRMPQ12912 555 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 MICU3Q86XE3 530 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 ORC3Q9UBD5 711 aaPredicted RBP20.91■□□□□ 0.94
MCF2L-221ENST00000469415 ADD1P35611 737 aaKnown RBP20.91■□□□□ 0.94
MCF2L-221ENST00000469415 CTSWP56202 376 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 CFAP45Q9UL16 551 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 ARFGEF2Q9Y6D5 1785 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 NOLC1Q14978 699 aaKnown RBP eCLIP20.91■□□□□ 0.94
MCF2L-221ENST00000469415 PALLDQ8WX93 1383 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 JCADQ9P266 1359 aa20.91■□□□□ 0.94
MCF2L-221ENST00000469415 B4E1Z4 1266 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 BIN1O00499 593 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 FSIP1Q8NA03 581 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 APPBP2Q92624 585 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 PHKBQ93100 1093 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 ZKSCAN3Q9BRR0 538 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 RIPOR2Q9Y4F9 1068 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 WTIPA6NIX2 430 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-221ENST00000469415 CYP19A1P11511 503 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-221ENST00000469415 ALDH8A1Q9H2A2 487 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-221ENST00000469415 CLSTN2Q9H4D0 955 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 DCCP43146 1447 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 ZNF532Q9HCE3 1301 aa20.9■□□□□ 0.94
MCF2L-221ENST00000469415 CCDC102BQ68D86 513 aa20.89■□□□□ 0.94
MCF2L-221ENST00000469415 BICDL1Q6ZP65 573 aa20.89■□□□□ 0.94
MCF2L-221ENST00000469415 CCDC186Q7Z3E2 898 aa20.89■□□□□ 0.94
MCF2L-221ENST00000469415 SMARCC2Q8TAQ2 1214 aa20.89■□□□□ 0.94
MCF2L-221ENST00000469415 C8orf76Q96K31 380 aa20.89■□□□□ 0.94
MCF2L-221ENST00000469415 CCDC73Q6ZRK6 1079 aa20.89■□□□□ 0.93
MCF2L-221ENST00000469415 MRC1P22897 1456 aa20.89■□□□□ 0.93
MCF2L-221ENST00000469415 MARCKSP29966 332 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-221ENST00000469415 TRDNQ13061 729 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 NFXL1Q6ZNB6 911 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 SDF4Q9BRK5 362 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 ADAMTS7Q9UKP4 1686 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 MCM5P33992 734 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 ANTXR2P58335 489 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 C11orf57Q6ZUT1 292 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-221ENST00000469415 CCDC24Q8N4L8 307 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 DDX19AQ9NUU7 478 aaKnown RBP20.88■□□□□ 0.93
MCF2L-221ENST00000469415 CTNNA3Q9UI47 895 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 ELP1O95163 1332 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 TBC1D10CQ8IV04 446 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 MPHOSPH8Q99549 860 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 KCNF1Q9H3M0 494 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 ZSCAN16Q9H4T2 348 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-221ENST00000469415 UBN2Q6ZU65 1347 aa20.88■□□□□ 0.93
MCF2L-221ENST00000469415 HMGN5P82970 282 aaKnown RBP20.87■□□□□ 0.93
MCF2L-221ENST00000469415 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-221ENST00000469415 CMTR1Q8N1G2 835 aaKnown RBP20.87■□□□□ 0.93
MCF2L-221ENST00000469415 NCOA7Q8NI08 942 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 KCPQ6ZWJ8 1503 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 CSF1RP07333 972 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 STK38Q15208 465 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 AIDAQ96BJ3 306 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
MCF2L-221ENST00000469415 PRKAB2O43741 272 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 KINO60870 393 aaKnown RBP20.86■□□□□ 0.93
MCF2L-221ENST00000469415 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 MAGEB6Q8N7X4 407 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 ARMT1Q9H993 441 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-221ENST00000469415 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.86■□□□□ 0.93
MCF2L-221ENST00000469415 PDE8BO95263 885 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 GNL2Q13823 731 aaKnown RBP20.86■□□□□ 0.93
MCF2L-221ENST00000469415 SUSD4Q5VX71 490 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 CYB5R4Q7L1T6 521 aa20.86■□□□□ 0.93
MCF2L-221ENST00000469415 ATP2B1P20020 1258 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 BCAMP50895 628 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 ABCF2Q9UG63 623 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 KIF3AQ9Y496 699 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 TPM2P07951 284 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 ARID5BQ14865 1188 aa20.85■□□□□ 0.93
MCF2L-221ENST00000469415 LRRFIP1Q32MZ4 808 aaKnown RBP20.85■□□□□ 0.93
MCF2L-221ENST00000469415 BECN2A8MW95 431 aa20.84■□□□□ 0.93
MCF2L-221ENST00000469415 GOLGA6L19H0YKK7 550 aa20.84■□□□□ 0.93
MCF2L-221ENST00000469415 PCDHA7Q9UN72 937 aa20.84■□□□□ 0.93
MCF2L-221ENST00000469415 PDE6AP16499 860 aa20.84■□□□□ 0.93
MCF2L-221ENST00000469415 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
MCF2L-221ENST00000469415 LLPHQ9BRT6 129 aaKnown RBP20.84■□□□□ 0.93
MCF2L-221ENST00000469415 KIF28PB7ZC32 967 aa20.83■□□□□ 0.93
MCF2L-221ENST00000469415 SMIM22K7EJ46 135 aa20.83■□□□□ 0.93
MCF2L-221ENST00000469415 HPS5Q9UPZ3 1129 aa20.83■□□□□ 0.93
MCF2L-221ENST00000469415 MBD4O95243 580 aa20.83■□□□□ 0.93
MCF2L-221ENST00000469415 ADD2P35612 726 aa20.83■□□□□ 0.93
MCF2L-221ENST00000469415 ZNF274Q96GC6 653 aaPredicted RBP20.83■□□□□ 0.93
MCF2L-221ENST00000469415 ZNF396Q96N95 335 aaPredicted RBP20.83■□□□□ 0.93
MCF2L-221ENST00000469415 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.92
MCF2L-221ENST00000469415 TRIM28Q13263 835 aaKnown RBP20.83■□□□□ 0.92
MCF2L-221ENST00000469415 NAA16Q6N069 864 aaPredicted RBP20.83■□□□□ 0.92
MCF2L-221ENST00000469415 MB21D2Q8IYB1 491 aaPredicted RBP20.83■□□□□ 0.92
MCF2L-221ENST00000469415 NBPF3Q9H094 633 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms