RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 SRP68Q9UHB9 627 aaKnown RBP7.08□□□□□ -1.28
PRKD3-207ENST00000469275 MYO5AQ9Y4I1 1855 aaKnown RBP7.08□□□□□ -1.28
PRKD3-207ENST00000469275 ZNF532Q9HCE3 1301 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 ERVV-1B6SEH8 477 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 PHF14O94880 888 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 LRSAM1Q6UWE0 723 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 CCDC144CPQ8IYA2 1237 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 ANP32BQ92688 251 aaKnown RBP7.08□□□□□ -1.28
PRKD3-207ENST00000469275 DSCC1Q9BVC3 393 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 JAG2Q9Y219 1238 aa7.08□□□□□ -1.28
PRKD3-207ENST00000469275 UTRNP46939 3433 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 RASGRF1Q13972 1273 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 MAGEB6Q8N7X4 407 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 MIGA1Q8NAN2 632 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 APPBP2Q92624 585 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 ABCF2Q9UG63 623 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 SPATA31A6Q5VVP1 1343 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 TAF1P21675 1872 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 CTDNEP1O95476 244 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 VASPP50552 380 aaPredicted RBP7.07□□□□□ -1.28
PRKD3-207ENST00000469275 PUM3Q15397 648 aaKnown RBP7.07□□□□□ -1.28
PRKD3-207ENST00000469275 IMMTQ16891 758 aaKnown RBP7.07□□□□□ -1.28
PRKD3-207ENST00000469275 TOMM22Q9NS69 142 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 ATP6V1DQ9Y5K8 247 aa7.07□□□□□ -1.28
PRKD3-207ENST00000469275 SMIM22K7EJ46 135 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 ZNF213O14771 459 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 NPHP1O15259 732 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 PRC1O43663 620 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 PRKAB2O43741 272 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 NTSR2O95665 410 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 PDE6AP16499 860 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 ADD2P35612 726 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 IGHMBP2P38935 993 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 GYG1P46976 350 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 CHRNDQ07001 517 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 AIDAQ96BJ3 306 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 MYL10Q9BUA6 226 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 CDCA7Q9BWT1 371 aaPredicted RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 ARMT1Q9H993 441 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 SENP2Q9HC62 589 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 THRAP3Q9Y2W1 955 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 COL4A1P02462 1669 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 LAMA4Q16363 1823 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 KLF18A0A0U1RQI7 1052 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 GNPATO15228 680 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 LIG1P18858 919 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 PDIA3P30101 505 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 UBE2HP62256 183 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 KRT85P78386 507 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 EXOSC10Q01780 885 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 SLC4A8Q2Y0W8 1093 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 CCDC152Q4G0S7 254 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 RRP12Q5JTH9 1297 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 TBC1D9BQ66K14 1250 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 RALYLQ86SE5 291 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 IFNLR1Q8IU57 520 aaPredicted RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 TBC1D10CQ8IV04 446 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 CKAP2LQ8IYA6 745 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 FAM43AQ8N2R8 423 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 NSUN7Q8NE18 718 aaKnown RBP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 LPIN2Q92539 896 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 ZKSCAN3Q9BRR0 538 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRKD3-207ENST00000469275 TSPY26PQ9H489 355 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 MYH3P11055 1940 aa7.06□□□□□ -1.28
PRKD3-207ENST00000469275 RFX7Q2KHR2 1363 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 GOLGA6L4A6NEF3 574 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 B4E1Z4 1266 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 MBD4O95243 580 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 SLC5A1P13866 664 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 SYAP1Q96A49 352 aaPredicted RBP7.05□□□□□ -1.28
PRKD3-207ENST00000469275 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 NBPF3Q9H094 633 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 USP21Q9UK80 565 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 ISY1Q9ULR0 285 aaKnown RBP7.05□□□□□ -1.28
PRKD3-207ENST00000469275 SPEF2Q9C093 1822 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 GOLGA8BA8MQT2 603 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 UBE2Q2LH0YL09 131 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 ZFYP08048 801 aaPredicted RBP7.05□□□□□ -1.28
PRKD3-207ENST00000469275 PDCP20941 246 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 KLRK1P26718 216 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 ANTXR2P58335 489 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 CELF1Q92879 486 aaKnown RBP7.05□□□□□ -1.28
PRKD3-207ENST00000469275 AIFM3Q96NN9 605 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 LRP2BPQ9P2M1 347 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 FBXO3Q9UK99 471 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 AKAP11Q9UKA4 1901 aa7.05□□□□□ -1.28
PRKD3-207ENST00000469275 MROH5Q6ZUA9 1318 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 A0A087WWV3 80 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 ESPNB1AK53 854 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 PFKFB2O60825 505 aa7.04□□□□□ -1.28
PRKD3-207ENST00000469275 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms