RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 ZMYM6O95789 1325 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 M0R2C6 588 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 ZBTB22O15209 634 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 FRAT2O75474 233 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 RPS6KB1P23443 525 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 AK2P54819 239 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 GRAPQ13588 217 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 AMIGO3Q86WK7 504 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 RPGRQ92834 1020 aaKnown RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 SEC62Q99442 399 aaKnown RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
SMC1A-205ENST00000469129 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
SMC1A-205ENST00000469129 IGSF3O75054 1194 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
SMC1A-205ENST00000469129 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 PRR5LQ6MZQ0 368 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
SMC1A-205ENST00000469129 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
SMC1A-205ENST00000469129 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
SMC1A-205ENST00000469129 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 DLEC1Q9Y238 1755 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 NAV1Q8NEY1 1877 aa11.12□□□□□ -0.63
SMC1A-205ENST00000469129 GPAA1O43292 621 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 SERPINB2P05120 415 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
SMC1A-205ENST00000469129 PDE6AP16499 860 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 MCM4P33991 863 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 IMMTQ16891 758 aaKnown RBP11.11□□□□□ -0.63
SMC1A-205ENST00000469129 TMC4Q7Z404 712 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 TNPO1Q92973 898 aaKnown RBP11.11□□□□□ -0.63
SMC1A-205ENST00000469129 OSBP2Q969R2 916 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
SMC1A-205ENST00000469129 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
SMC1A-205ENST00000469129 TFCP2L1Q9NZI6 479 aa11.11□□□□□ -0.63
SMC1A-205ENST00000469129 XDHP47989 1333 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 ZNF532Q9HCE3 1301 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 CYP21A2P08686 494 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 GNAT2P19087 354 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 TM4SF1P30408 202 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 SLC15A2Q16348 729 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 CRY2Q49AN0 593 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 CLEC17AQ6ZS10 378 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
SMC1A-205ENST00000469129 COL1A1P02452 1464 aaPredicted RBP11.1□□□□□ -0.63
SMC1A-205ENST00000469129 FOCADQ5VW36 1801 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
SMC1A-205ENST00000469129 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
SMC1A-205ENST00000469129 BCAMP50895 628 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 ZGPATQ8N5A5 531 aaKnown RBP11.09□□□□□ -0.63
SMC1A-205ENST00000469129 PUS7LQ9H0K6 701 aaKnown RBP11.09□□□□□ -0.63
SMC1A-205ENST00000469129 LRP2BPQ9P2M1 347 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 SMC3Q9UQE7 1217 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
SMC1A-205ENST00000469129 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
SMC1A-205ENST00000469129 TCRBV5S4A2TA0A5A2 114 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 CHGBP05060 677 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 CPA1P15085 419 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 FGD1P98174 961 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 MAGEB6Q8N7X4 407 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 WWC3Q9ULE0 1092 aa11.08□□□□□ -0.64
SMC1A-205ENST00000469129 TCHHQ07283 1943 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 E7EWF7 191 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 GYG1P46976 350 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 DDR1Q08345 913 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 ALX1Q15699 326 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 SKOR2Q2VWA4 1001 aaPredicted RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 ZNF804AQ7Z570 1209 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 FBXO33Q7Z6M2 555 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
SMC1A-205ENST00000469129 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 CRAMP1Q96RY5 1269 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 NACAP1Q9BZK3 213 aa11.07□□□□□ -0.64
SMC1A-205ENST00000469129 MYH6P13533 1939 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 MYH8P13535 1937 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms