RNA–Protein interactions for RNA: ENST00000469065.1

SEMA4A-211, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-211ENST00000469065 MCM10Q7L590 875 aa13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 PAWRQ96IZ0 340 aaKnown RBP13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 ELP3Q9H9T3 547 aa13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
SEMA4A-211ENST00000469065 TTC28Q96AY4 2481 aa13.9□□□□□ -0.18
SEMA4A-211ENST00000469065 OSBPP22059 807 aa13.9□□□□□ -0.18
SEMA4A-211ENST00000469065 ARHGAP39Q9C0H5 1083 aa13.9□□□□□ -0.18
SEMA4A-211ENST00000469065 COA1Q9GZY4 146 aa13.9□□□□□ -0.18
SEMA4A-211ENST00000469065 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
SEMA4A-211ENST00000469065 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.19
SEMA4A-211ENST00000469065 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 VCANP13611 3396 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 USP2O75604 605 aaPredicted RBP13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 DACT2Q5SW24 774 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 TTLL5Q6EMB2 1281 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 MTMR14Q8NCE2 650 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 FAM161BQ96MY7 647 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 ADGRA2Q96PE1 1338 aa13.89□□□□□ -0.19
SEMA4A-211ENST00000469065 GJA5P36382 358 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 PXYLP1Q8TE99 480 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 SNX27Q96L92 541 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 CDX2Q99626 313 aaPredicted RBP13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 SCN9AQ15858 1988 aa13.88□□□□□ -0.19
SEMA4A-211ENST00000469065 ADCY3O60266 1144 aa13.87□□□□□ -0.19
SEMA4A-211ENST00000469065 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
SEMA4A-211ENST00000469065 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
SEMA4A-211ENST00000469065 HOOK2Q96ED9 719 aa13.87□□□□□ -0.19
SEMA4A-211ENST00000469065 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 FOSL2P15408 326 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 C17orf99Q6UX52 265 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 KIAA0825Q8IV33 1275 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 LAMB2P55268 1798 aa13.86□□□□□ -0.19
SEMA4A-211ENST00000469065 PSME4Q14997 1843 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 SYN1P17600 705 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 COPS6Q7L5N1 327 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 PHACTR3Q96KR7 559 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
SEMA4A-211ENST00000469065 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 TNNI2P48788 182 aa13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 NBPF12Q5TAG4 269 aaPredicted RBP13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 ATXN2LQ8WWM7 1075 aaKnown RBP13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 FAM89AQ96GI7 184 aa13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 C11orf49Q9H6J7 331 aa13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
SEMA4A-211ENST00000469065 BTBD19C9JJ37 291 aa13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 INHAP05111 366 aa13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 CDC5LQ99459 802 aaKnown RBP13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 SEMA6BQ9H3T3 888 aa13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
SEMA4A-211ENST00000469065 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 PRKCZQ05513 592 aa13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 IRF5Q13568 498 aa13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 RASA3Q14644 834 aa13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 CPA4Q9UI42 421 aa13.82□□□□□ -0.2
SEMA4A-211ENST00000469065 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 VGLL4Q14135 290 aa13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 ANKRD23Q86SG2 305 aa13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
SEMA4A-211ENST00000469065 SPTBN5Q9NRC6 3674 aaKnown RBP13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 COA7Q96BR5 231 aa13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
SEMA4A-211ENST00000469065 PPIL2Q13356 520 aa13.79□□□□□ -0.2
SEMA4A-211ENST00000469065 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
SEMA4A-211ENST00000469065 XAGE3Q8WTP9 111 aa13.79□□□□□ -0.2
SEMA4A-211ENST00000469065 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEMA4A-211ENST00000469065 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 PDHXO00330 501 aa13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 GTF2IP78347 998 aa13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 SMAD3P84022 425 aaKnown RBP13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEMA4A-211ENST00000469065 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms