RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 OSGEPQ9NPF4 335 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 LATS2Q9NRM7 1088 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 PEAR1Q5VY43 1037 aaPredicted RBP8.92□□□□□ -0.98
LSM5-209ENST00000468872 SLC7A3Q8WY07 619 aa8.92□□□□□ -0.98
LSM5-209ENST00000468872 CEP41Q9BYV8 373 aa8.92□□□□□ -0.98
LSM5-209ENST00000468872 SOWAHDA6NJG2 315 aa8.91□□□□□ -0.98
LSM5-209ENST00000468872 ARTNQ5T4W7 220 aa8.91□□□□□ -0.98
LSM5-209ENST00000468872 VN1R5Q7Z5H4 357 aa8.91□□□□□ -0.98
LSM5-209ENST00000468872 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
LSM5-209ENST00000468872 BHLHE41Q9C0J9 482 aaPredicted RBP8.91□□□□□ -0.98
LSM5-209ENST00000468872 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
LSM5-209ENST00000468872 NLRP12P59046 1061 aa8.9□□□□□ -0.98
LSM5-209ENST00000468872 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
LSM5-209ENST00000468872 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
LSM5-209ENST00000468872 HGSNATQ68CP4 663 aa8.9□□□□□ -0.98
LSM5-209ENST00000468872 POLR3DP05423 398 aaPredicted RBP8.89□□□□□ -0.99
LSM5-209ENST00000468872 FSTP19883 344 aa8.89□□□□□ -0.99
LSM5-209ENST00000468872 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
LSM5-209ENST00000468872 ARMC10Q8N2F6 343 aa8.89□□□□□ -0.99
LSM5-209ENST00000468872 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
LSM5-209ENST00000468872 ZFP64Q9NPA5 681 aa8.89□□□□□ -0.99
LSM5-209ENST00000468872 SOX1O00570 391 aaPredicted RBP8.88□□□□□ -0.99
LSM5-209ENST00000468872 ARL4DP49703 201 aa8.88□□□□□ -0.99
LSM5-209ENST00000468872 IKBKEQ14164 716 aa8.88□□□□□ -0.99
LSM5-209ENST00000468872 UVSSAQ2YD98 709 aa8.88□□□□□ -0.99
LSM5-209ENST00000468872 FAM46AQ96IP4 442 aaKnown RBP8.88□□□□□ -0.99
LSM5-209ENST00000468872 RAXQ9Y2V3 346 aa8.88□□□□□ -0.99
LSM5-209ENST00000468872 DHX15O43143 795 aaKnown RBP8.87□□□□□ -0.99
LSM5-209ENST00000468872 NDUFB5O43674 189 aa8.87□□□□□ -0.99
LSM5-209ENST00000468872 LRP8Q14114 963 aa8.87□□□□□ -0.99
LSM5-209ENST00000468872 SLC51AQ86UW1 340 aa8.87□□□□□ -0.99
LSM5-209ENST00000468872 RNF112Q9ULX5 631 aa8.87□□□□□ -0.99
LSM5-209ENST00000468872 METTL12A8MUP2 240 aa8.86□□□□□ -0.99
LSM5-209ENST00000468872 GALNT12Q8IXK2 581 aa8.86□□□□□ -0.99
LSM5-209ENST00000468872 UTP4Q969X6 686 aaKnown RBP8.86□□□□□ -0.99
LSM5-209ENST00000468872 RNF208Q9H0X6 261 aa8.86□□□□□ -0.99
LSM5-209ENST00000468872 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
LSM5-209ENST00000468872 A0A1W2PP55 124 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 USPL1Q5W0Q7 1092 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 ANKRD34AQ69YU3 496 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 MYRFLQ96LU7 910 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 FAM129BQ96TA1 746 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
LSM5-209ENST00000468872 HYAL3O43820 417 aaPredicted RBP8.84□□□□□ -0.99
LSM5-209ENST00000468872 NEFLP07196 543 aa8.84□□□□□ -0.99
LSM5-209ENST00000468872 ESRRAP11474 423 aaPredicted RBP8.84□□□□□ -0.99
LSM5-209ENST00000468872 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
LSM5-209ENST00000468872 SOX17Q9H6I2 414 aaPredicted RBP8.84□□□□□ -0.99
LSM5-209ENST00000468872 MEGF11A6BM72 1044 aa8.83□□□□□ -1
LSM5-209ENST00000468872 ORC1Q13415 861 aa8.83□□□□□ -1
LSM5-209ENST00000468872 CCNJLQ8IV13 435 aa8.83□□□□□ -1
LSM5-209ENST00000468872 CITED4Q96RK1 184 aa8.83□□□□□ -1
LSM5-209ENST00000468872 TCF12Q99081 682 aa8.83□□□□□ -1
LSM5-209ENST00000468872 LIN7BQ9HAP6 207 aa8.83□□□□□ -1
LSM5-209ENST00000468872 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
LSM5-209ENST00000468872 A0A096LPE4 126 aa8.82□□□□□ -1
LSM5-209ENST00000468872 A0A1W2PPZ6 126 aa8.82□□□□□ -1
LSM5-209ENST00000468872 GSC2O15499 205 aa8.82□□□□□ -1
LSM5-209ENST00000468872 SART1O43290 800 aaKnown RBP8.82□□□□□ -1
LSM5-209ENST00000468872 IGLV1-40P01703 118 aa8.82□□□□□ -1
LSM5-209ENST00000468872 PREPP48147 710 aa8.82□□□□□ -1
LSM5-209ENST00000468872 FDX2Q6P4F2 183 aa8.82□□□□□ -1
LSM5-209ENST00000468872 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
LSM5-209ENST00000468872 USP26Q9BXU7 913 aa8.82□□□□□ -1
LSM5-209ENST00000468872 C7orf69Q9H7B7 122 aa8.82□□□□□ -1
LSM5-209ENST00000468872 LOC100289279A0A1B0GTE1 492 aa8.81□□□□□ -1
LSM5-209ENST00000468872 IGHA2P01877 340 aa8.81□□□□□ -1
LSM5-209ENST00000468872 GRIA4P48058 902 aa8.81□□□□□ -1
LSM5-209ENST00000468872 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
LSM5-209ENST00000468872 TRIM42Q8IWZ5 723 aa8.81□□□□□ -1
LSM5-209ENST00000468872 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
LSM5-209ENST00000468872 GPR182O15218 404 aa8.8□□□□□ -1
LSM5-209ENST00000468872 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
LSM5-209ENST00000468872 BMP3P12645 472 aa8.8□□□□□ -1
LSM5-209ENST00000468872 GSTM4Q03013 218 aa8.8□□□□□ -1
LSM5-209ENST00000468872 SPRED3Q2MJR0 410 aa8.8□□□□□ -1
LSM5-209ENST00000468872 NUTM2GQ5VZR2 741 aa8.8□□□□□ -1
LSM5-209ENST00000468872 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
LSM5-209ENST00000468872 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
LSM5-209ENST00000468872 HMX2A2RU54 273 aa8.79□□□□□ -1
LSM5-209ENST00000468872 DLGAP3O95886 979 aa8.79□□□□□ -1
LSM5-209ENST00000468872 PCDH1Q08174 1060 aa8.79□□□□□ -1
LSM5-209ENST00000468872 NFIAQ12857 509 aa8.79□□□□□ -1
LSM5-209ENST00000468872 ZNF423Q2M1K9 1284 aa8.79□□□□□ -1
LSM5-209ENST00000468872 KIAA0319Q5VV43 1072 aa8.79□□□□□ -1
LSM5-209ENST00000468872 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
LSM5-209ENST00000468872 NBPF11Q86T75 865 aa8.79□□□□□ -1
LSM5-209ENST00000468872 CLEC10AQ8IUN9 316 aa8.79□□□□□ -1
LSM5-209ENST00000468872 TMC1Q8TDI8 760 aa8.79□□□□□ -1
LSM5-209ENST00000468872 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
LSM5-209ENST00000468872 NPHS2Q9NP85 383 aa8.79□□□□□ -1
LSM5-209ENST00000468872 BEND4Q6ZU67 534 aa8.78□□□□□ -1
LSM5-209ENST00000468872 SMG8Q8ND04 991 aaKnown RBP8.78□□□□□ -1
LSM5-209ENST00000468872 FAM83CQ9BQN1 747 aa8.78□□□□□ -1
LSM5-209ENST00000468872 NRSN2Q9GZP1 204 aa8.78□□□□□ -1
LSM5-209ENST00000468872 NIF3L1Q9GZT8 377 aa8.78□□□□□ -1
LSM5-209ENST00000468872 HIF3AQ9Y2N7 669 aa8.78□□□□□ -1
LSM5-209ENST00000468872 EIF1AYO14602 144 aaKnown RBP8.77□□□□□ -1.01
LSM5-209ENST00000468872 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms