RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CCDC191Q8NCU4 936 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 COL16A1Q07092 1604 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 KINO60870 393 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 CDC25BP30305 580 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 CCDC144BQ3MJ40 725 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 CACTINQ8WUQ7 758 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 PUS3Q9BZE2 481 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 ME1P48163 572 aa18.46■□□□□ 0.55
TSPAN4-211ENST00000468468 C16orf45Q96MC5 204 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-211ENST00000468468 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
TSPAN4-211ENST00000468468 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
TSPAN4-211ENST00000468468 TJP1Q07157 1748 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 EXOC5O00471 708 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 FAM160A1Q05DH4 1040 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 FSIP1Q8NA03 581 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 ENGASEQ8NFI3 743 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 BECN2A8MW95 431 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 SARM1Q6SZW1 724 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
TSPAN4-211ENST00000468468 CARMIL3Q8ND23 1372 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 AHDC1Q5TGY3 1603 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 A0A087WWV3 80 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 CIAO1O76071 339 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 ISCA1Q9BUE6 129 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 FDPSP14324 419 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
TSPAN4-211ENST00000468468 ITGB4P16144 1822 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 MRFAP1L1Q96HT8 127 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 GPHNQ9NQX3 736 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 BCL9O00512 1426 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 STARD3NLO95772 234 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 TNNT1P13805 278 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 TEX13AQ9BXU3 409 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-211ENST00000468468 CTIFO43310 598 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 HAND2P61296 217 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 WASHC4Q2M389 1173 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 TPD52L1Q16890 204 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 CCDC158Q5M9N0 1113 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 TTC39AQ5SRH9 613 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 ERCC4Q92889 916 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 CTNNA3Q9UI47 895 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 OTUD7BQ6GQQ9 843 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 LRRC8AQ8IWT6 810 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 DHX40Q8IX18 779 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
TSPAN4-211ENST00000468468 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 A0A0G2JS52 829 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 IMMTQ16891 758 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 LRRFIP1Q32MZ4 808 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 PDCL2Q8N4E4 241 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 MRPS27Q92552 414 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 RTEL1Q9NZ71 1219 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 ADORA1P30542 326 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 EVCP57679 992 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 ARID5BQ14865 1188 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 HLFQ16534 295 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 FBXL16Q8N461 479 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
TSPAN4-211ENST00000468468 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 CEP57L1Q8IYX8 460 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 SYNE4Q8N205 404 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 ANKRD7Q92527 254 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 XAGE2Q96GT9 111 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 SDF4Q9BRK5 362 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 CYP19A1P11511 503 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 GPTP24298 496 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 ADALQ6DHV7 355 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 FMR1NBQ8N0W7 255 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
TSPAN4-211ENST00000468468 A0A1B0GVL5 298 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 FOXP2O15409 715 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 C8orf76Q96K31 380 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 SPEF2Q9C093 1822 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 LTBP4Q8N2S1 1624 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 PRC1O43663 620 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 NEMFO60524 1076 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 FGAP02671 866 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms