RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 ARHGAP27Q6ZUM4 889 aa12.85□□□□□ -0.35
CKAP2-205ENST00000468284 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
CKAP2-205ENST00000468284 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
CKAP2-205ENST00000468284 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
CKAP2-205ENST00000468284 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
CKAP2-205ENST00000468284 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
CKAP2-205ENST00000468284 TAF1LQ8IZX4 1826 aa12.84□□□□□ -0.35
CKAP2-205ENST00000468284 MX2P20592 715 aa12.84□□□□□ -0.35
CKAP2-205ENST00000468284 FSTL1Q12841 308 aa12.84□□□□□ -0.35
CKAP2-205ENST00000468284 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
CKAP2-205ENST00000468284 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
CKAP2-205ENST00000468284 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
CKAP2-205ENST00000468284 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 BCRP11274 1271 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 PHKA2P46019 1235 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 XAGE2Q96GT9 111 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 RRAGCQ9HB90 399 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 GPAMQ9HCL2 828 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
CKAP2-205ENST00000468284 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 HRH3Q9Y5N1 445 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 MEGF6O75095 1541 aa12.83□□□□□ -0.36
CKAP2-205ENST00000468284 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
CKAP2-205ENST00000468284 IRF5Q13568 498 aa12.82□□□□□ -0.36
CKAP2-205ENST00000468284 SLFNL1Q499Z3 407 aa12.82□□□□□ -0.36
CKAP2-205ENST00000468284 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
CKAP2-205ENST00000468284 ACDQ96AP0 544 aa12.82□□□□□ -0.36
CKAP2-205ENST00000468284 FAM208AQ9UK61 1670 aaKnown RBP12.82□□□□□ -0.36
CKAP2-205ENST00000468284 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 TMEM214Q6NUQ4 689 aaKnown RBP12.81□□□□□ -0.36
CKAP2-205ENST00000468284 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
CKAP2-205ENST00000468284 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
CKAP2-205ENST00000468284 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 A0A1B0GTH6 734 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 FBLN1P23142 703 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 USP4Q13107 963 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 SUZ12Q15022 739 aaKnown RBP12.8□□□□□ -0.36
CKAP2-205ENST00000468284 PHTF2Q8N3S3 785 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 NEDD1Q8NHV4 660 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 EVC2Q86UK5 1308 aa12.8□□□□□ -0.36
CKAP2-205ENST00000468284 THBS1P07996 1170 aa12.79□□□□□ -0.36
CKAP2-205ENST00000468284 GPAT2Q6NUI2 795 aa12.79□□□□□ -0.36
CKAP2-205ENST00000468284 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
CKAP2-205ENST00000468284 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
CKAP2-205ENST00000468284 MMP10P09238 476 aa12.78□□□□□ -0.36
CKAP2-205ENST00000468284 DPEP1P16444 411 aa12.78□□□□□ -0.36
CKAP2-205ENST00000468284 IP6K1Q92551 441 aa12.78□□□□□ -0.36
CKAP2-205ENST00000468284 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
CKAP2-205ENST00000468284 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
CKAP2-205ENST00000468284 PKD1L3Q7Z443 1732 aa12.77□□□□□ -0.36
CKAP2-205ENST00000468284 KIF13BQ9NQT8 1826 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 OXLD1Q5BKU9 147 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 CFHR5Q9BXR6 569 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.37
CKAP2-205ENST00000468284 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
CKAP2-205ENST00000468284 VAC14Q08AM6 782 aa12.76□□□□□ -0.37
CKAP2-205ENST00000468284 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
CKAP2-205ENST00000468284 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
CKAP2-205ENST00000468284 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
CKAP2-205ENST00000468284 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
CKAP2-205ENST00000468284 KCNA3P22001 575 aa12.75□□□□□ -0.37
CKAP2-205ENST00000468284 MAP2K3P46734 347 aa12.75□□□□□ -0.37
CKAP2-205ENST00000468284 TGFB2P61812 414 aa12.75□□□□□ -0.37
CKAP2-205ENST00000468284 FOXK2Q01167 660 aa12.75□□□□□ -0.37
CKAP2-205ENST00000468284 PHF24Q9UPV7 400 aa12.75□□□□□ -0.37
CKAP2-205ENST00000468284 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 LOC100996750A0A140TA64 210 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 IGHA1P01876 353 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 LBRQ14739 615 aaKnown RBP12.74□□□□□ -0.37
CKAP2-205ENST00000468284 TLR1Q15399 786 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 PGBD3Q8N328 593 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 BEND7Q8N7W2 519 aaPredicted RBP12.74□□□□□ -0.37
CKAP2-205ENST00000468284 RHBDD1Q8TEB9 315 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 OXCT2Q9BYC2 517 aaPredicted RBP12.74□□□□□ -0.37
CKAP2-205ENST00000468284 KRTAP4-6Q9BYQ5 205 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 RUBCNLQ9H714 662 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 GDPD2Q9HCC8 539 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
CKAP2-205ENST00000468284 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
CKAP2-205ENST00000468284 C10orf71Q711Q0 1435 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 FOXN1O15353 648 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 SSFA2P28290 1259 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 MSX1P28360 303 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 HOXC9P31274 260 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 ABL2P42684 1182 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
CKAP2-205ENST00000468284 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
CKAP2-205ENST00000468284 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms