RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 ADAMTS19Q8TE59 1207 aa6.36□□□□□ -1.39
RIF1-209ENST00000467762 INTS4Q96HW7 963 aaKnown RBP6.36□□□□□ -1.39
RIF1-209ENST00000467762 GJD4Q96KN9 370 aaPredicted RBP6.36□□□□□ -1.39
RIF1-209ENST00000467762 KCTD15Q96SI1 283 aaPredicted RBP6.36□□□□□ -1.39
RIF1-209ENST00000467762 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
RIF1-209ENST00000467762 STAP2Q9UGK3 403 aa6.36□□□□□ -1.39
RIF1-209ENST00000467762 PEAK1Q9H792 1746 aa6.36□□□□□ -1.39
RIF1-209ENST00000467762 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
RIF1-209ENST00000467762 ADGRL3Q9HAR2 1447 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 MSH6P52701 1360 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 FAM83GA6ND36 823 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 SDSP20132 328 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 FBLN1P23142 703 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 MARSP56192 900 aaKnown RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 ZNF445P59923 1031 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 SCARF1Q14162 830 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 MLECQ14165 292 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 TAF7Q15545 349 aaPredicted RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 INTS6LQ5JSJ4 861 aaKnown RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 PPP1R26Q5T8A7 1209 aaPredicted RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 NGDNQ8NEJ9 315 aaKnown RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 TRIM44Q96DX7 344 aaPredicted RBP6.35□□□□□ -1.39
RIF1-209ENST00000467762 LRRCC1Q9C099 1032 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 GPSM3Q9Y4H4 160 aa6.35□□□□□ -1.39
RIF1-209ENST00000467762 XRN1Q8IZH2 1706 aaKnown RBP6.34□□□□□ -1.39
RIF1-209ENST00000467762 MAP3K19Q56UN5 1328 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 BAG4O95429 457 aaKnown RBP6.34□□□□□ -1.39
RIF1-209ENST00000467762 MBD3O95983 291 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 CYP2E1P05181 493 aaPredicted RBP6.34□□□□□ -1.39
RIF1-209ENST00000467762 ARID4AP29374 1257 aaPredicted RBP6.34□□□□□ -1.39
RIF1-209ENST00000467762 VEGFBP49765 207 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 PDE1AP54750 535 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 CBLBQ13191 982 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
RIF1-209ENST00000467762 HSP90AB2PQ58FF8 381 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 MCM10Q7L590 875 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 NDUFB9Q9Y6M9 179 aa6.34□□□□□ -1.39
RIF1-209ENST00000467762 OVOS2A0A0G2JMS6 1433 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 MAP3K5Q99683 1374 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 BMP2P12643 396 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 KCNH5Q8NCM2 988 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 PNMA1Q8ND90 353 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 SYAP1Q96A49 352 aaPredicted RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 PPP1R9BQ96SB3 815 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 MEIS3Q99687 375 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 CDV3Q9UKY7 258 aaKnown RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 DDX49Q9Y6V7 483 aaKnown RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 TUBGCP6Q96RT7 1819 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 PIK3C2AO00443 1686 aa6.33□□□□□ -1.4
RIF1-209ENST00000467762 FAM208AQ9UK61 1670 aaKnown RBP6.33□□□□□ -1.4
RIF1-209ENST00000467762 PLEKHG2Q9H7P9 1386 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 PHRF1Q9P1Y6 1649 aaKnown RBP6.32□□□□□ -1.4
RIF1-209ENST00000467762 SALL3Q9BXA9 1300 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 GPR37L1O60883 481 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 LETM1O95202 739 aaPredicted RBP6.32□□□□□ -1.4
RIF1-209ENST00000467762 MX1P20591 662 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 LTKP29376 864 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 MCM5P33992 734 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 RAB15P59190 212 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 CUL4AQ13619 759 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 AMOTQ4VCS5 1084 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 DPH6Q7L8W6 267 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 NOP9Q86U38 636 aaKnown RBP6.32□□□□□ -1.4
RIF1-209ENST00000467762 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
RIF1-209ENST00000467762 LMTK3Q96Q04 1460 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 NCAPD2Q15021 1401 aa6.32□□□□□ -1.4
RIF1-209ENST00000467762 RGPD8O14715 1765 aaPredicted RBP6.31□□□□□ -1.4
RIF1-209ENST00000467762 AK9Q5TCS8 1911 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 FBXO45P0C2W1 286 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 UBTFL1P0CB47 393 aaPredicted RBP6.31□□□□□ -1.4
RIF1-209ENST00000467762 HOXC9P31274 260 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 TERF1P54274 439 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
RIF1-209ENST00000467762 SLC4A10Q6U841 1118 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 DZIP3Q86Y13 1208 aaKnown RBP6.31□□□□□ -1.4
RIF1-209ENST00000467762 ERC1Q8IUD2 1116 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 RUFY2Q8WXA3 655 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 IP6K1Q92551 441 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 ESYT1Q9BSJ8 1104 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 TMPRSS4Q9NRS4 437 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 BIN2Q9UBW5 565 aaPredicted RBP6.31□□□□□ -1.4
RIF1-209ENST00000467762 RIPOR2Q9Y4F9 1068 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 FER1L4A9Z1Z3 1794 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 CEMIPQ8WUJ3 1361 aa6.31□□□□□ -1.4
RIF1-209ENST00000467762 TTC41PQ6P2S7 1318 aa6.3□□□□□ -1.4
RIF1-209ENST00000467762 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
RIF1-209ENST00000467762 ANKRD33BA6NCL7 494 aa6.3□□□□□ -1.4
RIF1-209ENST00000467762 SOWAHDA6NJG2 315 aa6.3□□□□□ -1.4
RIF1-209ENST00000467762 ESPNB1AK53 854 aa6.3□□□□□ -1.4
RIF1-209ENST00000467762 H3BM21 787 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms