RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 NPHS2Q9NP85 383 aa6.97□□□□□ -1.29
SMC4-208ENST00000467468 TREHO43280 583 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
SMC4-208ENST00000467468 C19orf57Q0VDD7 668 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 CCNJLQ8IV13 435 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 SLC7A3Q8WY07 619 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 NLRP2Q9NX02 1062 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 TRAK1Q9UPV9 953 aa6.96□□□□□ -1.3
SMC4-208ENST00000467468 ATP2B2Q01814 1243 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 GALNT11Q8NCW6 608 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 DDX54Q8TDD1 881 aaKnown RBP6.95□□□□□ -1.3
SMC4-208ENST00000467468 WFDC12Q8WWY7 111 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
SMC4-208ENST00000467468 PPP4R2Q9NY27 417 aa6.95□□□□□ -1.3
SMC4-208ENST00000467468 A0A096LPE4 126 aa6.94□□□□□ -1.3
SMC4-208ENST00000467468 PNMA6FA0A0J9YX94 578 aa6.94□□□□□ -1.3
SMC4-208ENST00000467468 A0A1W2PPZ6 126 aa6.94□□□□□ -1.3
SMC4-208ENST00000467468 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
SMC4-208ENST00000467468 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
SMC4-208ENST00000467468 DOC2BQ14184 412 aa6.94□□□□□ -1.3
SMC4-208ENST00000467468 DUOXA2Q1HG44 320 aa6.94□□□□□ -1.3
SMC4-208ENST00000467468 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
SMC4-208ENST00000467468 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
SMC4-208ENST00000467468 CLEC4MQ9H2X3 399 aaPredicted RBP6.94□□□□□ -1.3
SMC4-208ENST00000467468 MAPK8P45983 427 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 DSC3Q14574 896 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
SMC4-208ENST00000467468 PRPF40BQ6NWY9 871 aaKnown RBP6.93□□□□□ -1.3
SMC4-208ENST00000467468 ACAD11Q709F0 780 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.93□□□□□ -1.3
SMC4-208ENST00000467468 VN1R5Q7Z5H4 357 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 FBF1Q8TES7 1133 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 TCF12Q99081 682 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 CEP41Q9BYV8 373 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 ZFYVE1Q9HBF4 777 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 TPSG1Q9NRR2 321 aa6.93□□□□□ -1.3
SMC4-208ENST00000467468 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
SMC4-208ENST00000467468 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
SMC4-208ENST00000467468 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
SMC4-208ENST00000467468 GLB1P16278 677 aa6.92□□□□□ -1.3
SMC4-208ENST00000467468 NOS3P29474 1203 aa6.92□□□□□ -1.3
SMC4-208ENST00000467468 PTPN12Q05209 780 aaKnown RBP6.92□□□□□ -1.3
SMC4-208ENST00000467468 FMR1Q06787 632 aaKnown RBP eCLIP6.92□□□□□ -1.33e-7■□□□□ 10
SMC4-208ENST00000467468 PCDH1Q08174 1060 aa6.92□□□□□ -1.3
SMC4-208ENST00000467468 KLHDC7BQ96G42 594 aa6.92□□□□□ -1.3
SMC4-208ENST00000467468 E9PSI1 815 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 FURINP09958 794 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 ITPKAP23677 461 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 GRIA4P48058 902 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 NLRP12P59046 1061 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 FGD1P98174 961 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
SMC4-208ENST00000467468 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
SMC4-208ENST00000467468 H2AFB1P0C5Y9 115 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 H2AFB2P0C5Z0 115 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
SMC4-208ENST00000467468 GRM2Q14416 872 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.3
SMC4-208ENST00000467468 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
SMC4-208ENST00000467468 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 USP26Q9BXU7 913 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 RNF208Q9H0X6 261 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 KCNK4Q9NYG8 393 aa6.9□□□□□ -1.3
SMC4-208ENST00000467468 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 ADAM11O75078 769 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 WISP1O95388 367 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 GSTM4Q03013 218 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 RPS26P11Q5JNZ5 115 aaPredicted RBP6.89□□□□□ -1.31
SMC4-208ENST00000467468 ANKRD34AQ69YU3 496 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 DTHD1Q6ZMT9 781 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 Q6ZS46 218 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.312e-85■■■■■ 286.7
SMC4-208ENST00000467468 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
SMC4-208ENST00000467468 ZNF576Q9H609 170 aa6.89□□□□□ -1.31
SMC4-208ENST00000467468 TM4SF5O14894 197 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 DDX3YO15523 660 aaKnown RBP6.88□□□□□ -1.31
SMC4-208ENST00000467468 ADAM23O75077 832 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 ALX3O95076 343 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 B3GALT4O96024 378 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 CYP11A1P05108 521 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 ERCC3P19447 782 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.312e-22■■■■■ 68.1
SMC4-208ENST00000467468 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
SMC4-208ENST00000467468 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMC4-208ENST00000467468 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
SMC4-208ENST00000467468 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
SMC4-208ENST00000467468 GIPC1O14908 333 aa6.87□□□□□ -1.31
SMC4-208ENST00000467468 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms