RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.46
CDCA7-206ENST00000467411 DDR1Q08345 913 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 PI16Q6UXB8 463 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 CNBD1Q8NA66 436 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 FBXO41Q8TF61 875 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.46
CDCA7-206ENST00000467411 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.46
CDCA7-206ENST00000467411 TAF6LQ9Y6J9 622 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.46
CDCA7-206ENST00000467411 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 EXOSC10Q01780 885 aaKnown RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 HELBQ8NG08 1087 aaPredicted RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 FOCADQ5VW36 1801 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 NUCB2P80303 420 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 TOB2Q14106 344 aaPredicted RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 ANKRD1Q15327 319 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 BICDL1Q6ZP65 573 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 FAM84BQ96KN1 310 aaPredicted RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
CDCA7-206ENST00000467411 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 PHF14O94880 888 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 SERPINB2P05120 415 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 EVCP57679 992 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
CDCA7-206ENST00000467411 PDE6AP16499 860 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 BCAMP50895 628 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 ST3GAL1Q11201 340 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 SLFNL1Q499Z3 407 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
CDCA7-206ENST00000467411 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
CDCA7-206ENST00000467411 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
CDCA7-206ENST00000467411 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
CDCA7-206ENST00000467411 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
CDCA7-206ENST00000467411 CTNNA3Q9UI47 895 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 ST5P78524 1137 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
CDCA7-206ENST00000467411 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
CDCA7-206ENST00000467411 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 DENND2AQ9ULE3 1009 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 MYH15Q9Y2K3 1946 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 MCM4P33991 863 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
CDCA7-206ENST00000467411 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
CDCA7-206ENST00000467411 GPAA1O43292 621 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 BRD1O95696 1058 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 APBA3O96018 575 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
CDCA7-206ENST00000467411 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 SNAP23O00161 211 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
CDCA7-206ENST00000467411 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
CDCA7-206ENST00000467411 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
CDCA7-206ENST00000467411 E7EWF7 191 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 MAP3K12Q12852 859 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 RBM17Q96I25 401 aaKnown RBP12.16□□□□□ -0.46
CDCA7-206ENST00000467411 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 XDHP47989 1333 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 BBOX1O75936 387 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 GNAT2P19087 354 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 PTMSP20962 102 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 FGAP02671 866 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
CDCA7-206ENST00000467411 RGS22Q8NE09 1264 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
CDCA7-206ENST00000467411 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
CDCA7-206ENST00000467411 LARGE1O95461 756 aa12.15□□□□□ -0.46
CDCA7-206ENST00000467411 ME3Q16798 604 aa12.15□□□□□ -0.46
CDCA7-206ENST00000467411 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-206ENST00000467411 NID2Q14112 1375 aa12.15□□□□□ -0.46
CDCA7-206ENST00000467411 CPA1P15085 419 aa12.15□□□□□ -0.46
CDCA7-206ENST00000467411 MB21D2Q8IYB1 491 aaPredicted RBP12.15□□□□□ -0.46
CDCA7-206ENST00000467411 PSME4Q14997 1843 aa12.15□□□□□ -0.47
CDCA7-206ENST00000467411 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.47
CDCA7-206ENST00000467411 WTIPA6NIX2 430 aaPredicted RBP12.14□□□□□ -0.47
CDCA7-206ENST00000467411 KCNJ4P48050 445 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
CDCA7-206ENST00000467411 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 IL1R1P14778 569 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 GYG1P46976 350 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 ANAPC4Q9UJX5 808 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 KLRK1P26718 216 aa12.14□□□□□ -0.47
CDCA7-206ENST00000467411 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
CDCA7-206ENST00000467411 A0A0G2JLW4 131 aa12.13□□□□□ -0.47
CDCA7-206ENST00000467411 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
CDCA7-206ENST00000467411 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
CDCA7-206ENST00000467411 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms