RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 SASH1O94885 1247 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 GJB1P08034 283 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 CCL5P13501 91 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 LRP10Q7Z4F1 713 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 NLRP10Q86W26 655 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 NKX2-3Q8TAU0 364 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 MS4A4AQ96JQ5 239 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 THUMPD2Q9BTF0 503 aaKnown RBP5.67□□□□□ -1.5
CPS1-205ENST00000467353 TRMT112Q9UI30 125 aaKnown RBP5.67□□□□□ -1.5
CPS1-205ENST00000467353 FARP1Q9Y4F1 1045 aaPredicted RBP5.67□□□□□ -1.5
CPS1-205ENST00000467353 RPTORQ8N122 1335 aa5.67□□□□□ -1.5
CPS1-205ENST00000467353 USP17L3A6NCW0 530 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 USP17L4A6NCW7 530 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 SPDYE16A6NNV3 312 aaPredicted RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 POTEB2H3BUK9 544 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 PITPNM1O00562 1244 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 FARP2O94887 1054 aaPredicted RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 CTGFP29279 349 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 RPS8P62241 208 aaKnown RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 CAMK2BQ13554 666 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 PDIA6Q15084 440 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 SF3B3Q15393 1217 aaKnown RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 TAF7Q15545 349 aaPredicted RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 BRI3BPQ8WY22 251 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 FAM122AQ96E09 287 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 CRISPLD2Q9H0B8 497 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 RNF208Q9H0X6 261 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 DEFB129Q9H1M3 183 aa5.66□□□□□ -1.5
CPS1-205ENST00000467353 POLR2AP24928 1970 aaKnown RBP5.66□□□□□ -1.5
CPS1-205ENST00000467353 TRIM66O15016 1216 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 USP2O75604 605 aaPredicted RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 UFL1O94874 794 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 PDIA4P13667 645 aaKnown RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 LACTBP83111 547 aaPredicted RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 TAF1CQ15572 869 aaPredicted RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 DACT2Q5SW24 774 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 FAM43AQ8N2R8 423 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 U2AF1L4Q8WU68 220 aaKnown RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 ZBED3Q96IU2 234 aaPredicted RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 FAM161BQ96MY7 647 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 ZFYVE28Q9HCC9 887 aa5.65□□□□□ -1.5
CPS1-205ENST00000467353 ZMYND8Q9ULU4 1186 aaPredicted RBP5.65□□□□□ -1.5
CPS1-205ENST00000467353 SH3TC1Q8TE82 1336 aa5.65□□□□□ -1.51
CPS1-205ENST00000467353 ZNF316A6NFI3 1004 aaPredicted RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 UNCXA6NJT0 531 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 PPP1R12BO60237 982 aaPredicted RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 TLR2O60603 784 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 SGPL1O95470 568 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 GNRH1P01148 92 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 ANXA1P04083 346 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 SYN1P17600 705 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 PRKAR2BP31323 418 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 GRK4P32298 578 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 MAGEA10P43363 369 aaPredicted RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 PRMT2P55345 433 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 EIF4A1P60842 406 aaKnown RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 TRIM26Q12899 539 aaPredicted RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 PROSER3Q2NL68 480 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 NBPF12Q5TAG4 269 aaPredicted RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 PODNQ7Z5L7 613 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 APOBEC3FQ8IUX4 373 aaKnown RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 TDHQ8IZJ6 230 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 OGFOD1Q8N543 542 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 RTF1Q92541 710 aaKnown RBP5.64□□□□□ -1.51
CPS1-205ENST00000467353 OPTNQ96CV9 577 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 FAM89AQ96GI7 184 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 TRIM47Q96LD4 638 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 UNC93B1Q9H1C4 597 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 ELP3Q9H9T3 547 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 ANKIB1Q9P2G1 1089 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 SRRDQ9UH36 339 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 GGA1Q9UJY5 639 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 KNSTRNQ9Y448 316 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 RIPOR2Q9Y4F9 1068 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
CPS1-205ENST00000467353 CCL15-CCL14A0A0B4J2E2 113 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 OSBPP22059 807 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 PSMC4P43686 418 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 KIF22Q14807 665 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 CCL15Q16663 113 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 SUPT20HL1Q3ZLR7 823 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 RTL5Q5HYW3 569 aaPredicted RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 FAM109BQ6ICB4 259 aaPredicted RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 COPS6Q7L5N1 327 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 ANKRD13AQ8IZ07 590 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 C7orf61Q8IZ16 206 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 DIS3LQ8TF46 1054 aaKnown RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 PAWRQ96IZ0 340 aaKnown RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 CDX2Q99626 313 aaPredicted RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 UBE2OQ9C0C9 1292 aaKnown RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 SEC31BQ9NQW1 1179 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 BIN2Q9UBW5 565 aaPredicted RBP5.63□□□□□ -1.51
CPS1-205ENST00000467353 PCDHAC2Q9Y5I4 1007 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 SSC5DA1L4H1 1573 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 COL4A1P02462 1669 aa5.63□□□□□ -1.51
CPS1-205ENST00000467353 TTC28Q96AY4 2481 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 APBB1O00213 710 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms