RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 NSUN7Q8NE18 718 aaKnown RBP13.49□□□□□ -0.25
HPS1-208ENST00000467246 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
HPS1-208ENST00000467246 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
HPS1-208ENST00000467246 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 NWD2Q9ULI1 1742 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 FAM184AQ8NB25 1140 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
HPS1-208ENST00000467246 ZNF532Q9HCE3 1301 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 H3BQV1 296 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 FOSBP53539 338 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
HPS1-208ENST00000467246 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
HPS1-208ENST00000467246 PTPDC1A2A3K4 754 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 ESPNB1AK53 854 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 ZNF213O14771 459 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 PDE6AP16499 860 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 RASGRF1Q13972 1273 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
HPS1-208ENST00000467246 LRP5O75197 1615 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 SLC5A1P13866 664 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 CLCN1P35523 988 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 RESTQ13127 1097 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 SPATA5Q8NB90 893 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 ZNF274Q96GC6 653 aaPredicted RBP13.47□□□□□ -0.25
HPS1-208ENST00000467246 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 DENND2AQ9ULE3 1009 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
HPS1-208ENST00000467246 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
HPS1-208ENST00000467246 MYO5AQ9Y4I1 1855 aaKnown RBP13.46□□□□□ -0.25
HPS1-208ENST00000467246 PRC1O43663 620 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 ANTXR2P58335 489 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 NBPF3Q9H094 633 aa13.46□□□□□ -0.25
HPS1-208ENST00000467246 ELP1O95163 1332 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 RREB1Q92766 1687 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 APPP05067 770 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 MCM5P33992 734 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 IGHMBP2P38935 993 aaKnown RBP13.46□□□□□ -0.26
HPS1-208ENST00000467246 BCAMP50895 628 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 FBXL16Q8N461 479 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.26
HPS1-208ENST00000467246 SPATA32Q96LK8 384 aa13.46□□□□□ -0.26
HPS1-208ENST00000467246 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.26
HPS1-208ENST00000467246 MYH7P12883 1935 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 EVCP57679 992 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
HPS1-208ENST00000467246 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 LETM1O95202 739 aaPredicted RBP13.45□□□□□ -0.26
HPS1-208ENST00000467246 LIG1P18858 919 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
HPS1-208ENST00000467246 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
HPS1-208ENST00000467246 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
HPS1-208ENST00000467246 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
HPS1-208ENST00000467246 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
HPS1-208ENST00000467246 CHRNDQ07001 517 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 TBC1D10CQ8IV04 446 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 MAGEB6Q8N7X4 407 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 ATRNO75882 1429 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 COL4A1P02462 1669 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
HPS1-208ENST00000467246 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
HPS1-208ENST00000467246 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 VPS72Q15906 364 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 AIDAQ96BJ3 306 aa13.44□□□□□ -0.26
HPS1-208ENST00000467246 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
HPS1-208ENST00000467246 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 ZSCAN16Q9H4T2 348 aaPredicted RBP13.43□□□□□ -0.26
HPS1-208ENST00000467246 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
HPS1-208ENST00000467246 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 FUCA2Q9BTY2 467 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 ADD1P35611 737 aaKnown RBP13.43□□□□□ -0.26
HPS1-208ENST00000467246 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
HPS1-208ENST00000467246 CAMK4Q16566 473 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 INCENPQ9NQS7 918 aa13.43□□□□□ -0.26
HPS1-208ENST00000467246 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
HPS1-208ENST00000467246 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
HPS1-208ENST00000467246 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms