RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-206ENST00000466971 METTL3Q86U44 580 aaKnown RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 KLHDC4Q8TBB5 520 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 KCNB2Q92953 911 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 CHMP4CQ96CF2 233 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 INTS4Q96HW7 963 aaKnown RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 NEUROD6Q96NK8 337 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 CDC5LQ99459 802 aaKnown RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 DBNDD2Q9BQY9 259 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 TMUB1Q9BVT8 246 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 FAM117AQ9C073 453 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 LSG1Q9H089 658 aaKnown RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 BOLA2Q9H3K6 86 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 ANTXR1Q9H6X2 564 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 CNNM1Q9NRU3 951 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 HELLSQ9NRZ9 838 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 NARFQ9UHQ1 456 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 CCNL1Q9UK58 526 aaPredicted RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 TBC1D2BQ9UPU7 963 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 NIP7Q9Y221 180 aaKnown RBP eCLIP5.74□□□□□ -1.49
NFX1-206ENST00000466971 RTCBQ9Y3I0 505 aaKnown RBP5.74□□□□□ -1.49
NFX1-206ENST00000466971 MED23Q9ULK4 1368 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 KAT6BQ8WYB5 2073 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 SBF2Q86WG5 1849 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 CCDC171Q6TFL3 1326 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 UBN2Q6ZU65 1347 aa5.74□□□□□ -1.49
NFX1-206ENST00000466971 DDX11L8A8MPP1 907 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 SNPHO15079 494 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 KCNQ2O43526 872 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 ZPR1O75312 459 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 NTSR2O95665 410 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 IFIT1P09914 478 aaKnown RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 SSFA2P28290 1259 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 SLC4A3P48751 1232 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 PUM3Q15397 648 aaKnown RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 ATP2B3Q16720 1220 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 TSGA10IPQ3SY00 556 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 MCMDC2Q4G0Z9 681 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 SLC10A5Q5PT55 438 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 TTC39AQ5SRH9 613 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 SUSD4Q5VX71 490 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 TMED8Q6PL24 325 aaPredicted RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 SEPT12Q8IYM1 358 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 LINC00116Q8NCU8 138 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 LPIN2Q92539 896 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 JARID2Q92833 1246 aaPredicted RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 MAP4K1Q92918 833 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 GBP4Q96PP9 640 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 MPHOSPH8Q99549 860 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.73□□□□□ -1.49
NFX1-206ENST00000466971 BCL2L12Q9HB09 334 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 GPCPD1Q9NPB8 672 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 PAG1Q9NWQ8 432 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 TLR7Q9NYK1 1049 aaKnown RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 LHX6Q9UPM6 363 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 RIPOR2Q9Y4F9 1068 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 ADGRG1Q9Y653 693 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 COL24A1Q17RW2 1714 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 DDX60Q8IY21 1712 aaKnown RBP5.73□□□□□ -1.49
NFX1-206ENST00000466971 ARAP2Q8WZ64 1704 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 RIC1Q4ADV7 1423 aa5.73□□□□□ -1.49
NFX1-206ENST00000466971 TAF1LQ8IZX4 1826 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 C4BP0C0L5 1744 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 PPP1R3GB7ZBB8 358 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 HMGB1P09429 215 aaKnown RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 SLC5A1P13866 664 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 HOXB1P14653 301 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 DDIT3P35638 169 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 KCNJ4P48050 445 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 NEK4P51957 841 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 NMIQ13287 307 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 NECTIN1Q15223 517 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 SF3B3Q15393 1217 aaKnown RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 NFKBIBQ15653 356 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 LRRC24Q50LG9 513 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 VPS53Q5VIR6 699 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 USPL1Q5W0Q7 1092 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 TPTE2Q6XPS3 522 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 XAGE2Q96GT9 111 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 ZSCAN31Q96LW9 406 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 SETDB2Q96T68 719 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 PHOX2BQ99453 314 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 DSCC1Q9BVC3 393 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 ALDH8A1Q9H2A2 487 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 SLKQ9H2G2 1235 aaPredicted RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 GREM2Q9H772 168 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 QTRT2Q9H974 415 aaKnown RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 GOPCQ9HD26 462 aa5.72□□□□□ -1.49
NFX1-206ENST00000466971 MYH14Q7Z406 1995 aaKnown RBP5.72□□□□□ -1.49
NFX1-206ENST00000466971 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 RNF113AO15541 343 aaKnown RBP5.71□□□□□ -1.5
NFX1-206ENST00000466971 OATP04181 439 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 GTF2E1P29083 439 aaPredicted RBP5.71□□□□□ -1.5
NFX1-206ENST00000466971 ARID4AP29374 1257 aaPredicted RBP5.71□□□□□ -1.5
NFX1-206ENST00000466971 RFC4P35249 363 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 PRSS12P56730 875 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 RBM6P78332 1123 aaKnown RBP5.71□□□□□ -1.5
NFX1-206ENST00000466971 CUL4AQ13619 759 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 RAB3GAP1Q15042 981 aa5.71□□□□□ -1.5
NFX1-206ENST00000466971 TRAPPC3LQ5T215 181 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms