RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
PDCD11-202ENST00000466959 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
PDCD11-202ENST00000466959 PSME4Q14997 1843 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 ERC2O15083 957 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
PDCD11-202ENST00000466959 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
PDCD11-202ENST00000466959 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
PDCD11-202ENST00000466959 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
PDCD11-202ENST00000466959 RGS3P49796 1198 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 COA1Q9GZY4 146 aa16.19■□□□□ 0.18
PDCD11-202ENST00000466959 COL4A5P29400 1685 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 ZNF646O15015 1829 aaPredicted RBP16.18■□□□□ 0.18
PDCD11-202ENST00000466959 G3V3G9 751 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 SEMA3EO15041 775 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 IL1R1P14778 569 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
PDCD11-202ENST00000466959 CD209Q9NNX6 404 aa16.18■□□□□ 0.18
PDCD11-202ENST00000466959 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
PDCD11-202ENST00000466959 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
PDCD11-202ENST00000466959 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
PDCD11-202ENST00000466959 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
PDCD11-202ENST00000466959 LARGE2Q8N3Y3 721 aa16.17■□□□□ 0.18
PDCD11-202ENST00000466959 PDS5AQ29RF7 1337 aaKnown RBP16.17■□□□□ 0.18
PDCD11-202ENST00000466959 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
PDCD11-202ENST00000466959 ECE2O60344 883 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 MCAMP43121 646 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 SCARF1Q14162 830 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 PODNQ7Z5L7 613 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 HAUS7Q99871 368 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 BOLA2Q9H3K6 86 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
PDCD11-202ENST00000466959 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
PDCD11-202ENST00000466959 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 FRAT2O75474 233 aaPredicted RBP16.15■□□□□ 0.18
PDCD11-202ENST00000466959 LMNB1P20700 586 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
PDCD11-202ENST00000466959 VEGFAP15692 232 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-202ENST00000466959 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
PDCD11-202ENST00000466959 FAM205AQ6ZU69 1335 aa16.14■□□□□ 0.17
PDCD11-202ENST00000466959 MYO5AQ9Y4I1 1855 aaKnown RBP16.14■□□□□ 0.17
PDCD11-202ENST00000466959 MYH7P12883 1935 aa16.13■□□□□ 0.17
PDCD11-202ENST00000466959 ZAP70P43403 619 aa16.13■□□□□ 0.17
PDCD11-202ENST00000466959 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
PDCD11-202ENST00000466959 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
PDCD11-202ENST00000466959 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
PDCD11-202ENST00000466959 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
PDCD11-202ENST00000466959 YDJCA8MPS7 323 aa16.12■□□□□ 0.17
PDCD11-202ENST00000466959 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
PDCD11-202ENST00000466959 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
PDCD11-202ENST00000466959 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
PDCD11-202ENST00000466959 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
PDCD11-202ENST00000466959 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
PDCD11-202ENST00000466959 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
PDCD11-202ENST00000466959 GOLIM4O00461 696 aa16.11■□□□□ 0.17
PDCD11-202ENST00000466959 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-202ENST00000466959 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-202ENST00000466959 GTF2IP78347 998 aa16.11■□□□□ 0.17
PDCD11-202ENST00000466959 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-202ENST00000466959 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
PDCD11-202ENST00000466959 SALL1Q9NSC2 1324 aa16.11■□□□□ 0.17
PDCD11-202ENST00000466959 USP17L3A6NCW0 530 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 USP17L4A6NCW7 530 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 USP17L1Q7RTZ2 530 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 EVI5LQ96CN4 794 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
PDCD11-202ENST00000466959 KCNQ5Q9NR82 932 aa16.1■□□□□ 0.17
PDCD11-202ENST00000466959 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
PDCD11-202ENST00000466959 FZD9O00144 591 aa16.09■□□□□ 0.17
PDCD11-202ENST00000466959 FKBP1AP62942 108 aaKnown RBP16.09■□□□□ 0.17
PDCD11-202ENST00000466959 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
PDCD11-202ENST00000466959 FBXW7Q969H0 707 aa16.09■□□□□ 0.17
PDCD11-202ENST00000466959 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
PDCD11-202ENST00000466959 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
PDCD11-202ENST00000466959 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
PDCD11-202ENST00000466959 RAD17O75943 681 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 SDSP20132 328 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
PDCD11-202ENST00000466959 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 RILPL2Q969X0 211 aa16.08■□□□□ 0.16
PDCD11-202ENST00000466959 PCNTO95613 3336 aa16.07■□□□□ 0.16
PDCD11-202ENST00000466959 IGSF3O75054 1194 aa16.07■□□□□ 0.16
PDCD11-202ENST00000466959 CXCL9Q07325 125 aa16.07■□□□□ 0.16
PDCD11-202ENST00000466959 TNIP1Q15025 636 aa16.07■□□□□ 0.16
PDCD11-202ENST00000466959 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms