RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TAF1CQ15572 869 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-214ENST00000465269 CDAN1Q8IWY9 1227 aa19.44■□□□□ 0.7
HDAC6-214ENST00000465269 OPTNQ96CV9 577 aa19.44■□□□□ 0.7
HDAC6-214ENST00000465269 COL1A1P02452 1464 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-214ENST00000465269 SNAP23O00161 211 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 CTSWP56202 376 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 FAM43AQ8N2R8 423 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 LRCH3Q96II8 777 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 PRO3102Q9H379 93 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 JAG2Q9Y219 1238 aa19.43■□□□□ 0.7
HDAC6-214ENST00000465269 IREB2P48200 963 aaKnown RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 PRMT6Q96LA8 375 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 CDC5LQ99459 802 aaKnown RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 BSDC1Q9NW68 430 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-214ENST00000465269 CCL15-CCL14A0A0B4J2E2 113 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 CCL15Q16663 113 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 SUPT20HL1Q3ZLR7 823 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 CFAP100Q494V2 611 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 ANKRD13AQ8IZ07 590 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 TTLL11Q8NHH1 800 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
HDAC6-214ENST00000465269 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
HDAC6-214ENST00000465269 RASA3Q14644 834 aa19.4■□□□□ 0.7
HDAC6-214ENST00000465269 ZFYVE28Q9HCC9 887 aa19.4■□□□□ 0.7
HDAC6-214ENST00000465269 TRIM35Q9UPQ4 493 aa19.4■□□□□ 0.7
HDAC6-214ENST00000465269 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
HDAC6-214ENST00000465269 SPDYE2BA6NHP3 402 aa19.38■□□□□ 0.69
HDAC6-214ENST00000465269 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-214ENST00000465269 SPDYE6P0CI01 402 aa19.38■□□□□ 0.69
HDAC6-214ENST00000465269 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-214ENST00000465269 PPP2R3BQ9Y5P8 575 aa19.38■□□□□ 0.69
HDAC6-214ENST00000465269 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 HOXB7P09629 217 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 CTGFP29279 349 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 MTMR14Q8NCE2 650 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 CD209Q9NNX6 404 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 VCANP13611 3396 aa19.37■□□□□ 0.69
HDAC6-214ENST00000465269 MMP14P50281 582 aa19.36■□□□□ 0.69
HDAC6-214ENST00000465269 LACTBP83111 547 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-214ENST00000465269 ARHGEF6Q15052 776 aa19.36■□□□□ 0.69
HDAC6-214ENST00000465269 UNCXA6NJT0 531 aa19.35■□□□□ 0.69
HDAC6-214ENST00000465269 ZBTB7BO15156 539 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-214ENST00000465269 IGKV5-2P06315 115 aa19.35■□□□□ 0.69
HDAC6-214ENST00000465269 RBM5P52756 815 aaKnown RBP eCLIP19.35■□□□□ 0.69
HDAC6-214ENST00000465269 VGLL4Q14135 290 aa19.35■□□□□ 0.69
HDAC6-214ENST00000465269 UBE2Q1Q7Z7E8 422 aa19.35■□□□□ 0.69
HDAC6-214ENST00000465269 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-214ENST00000465269 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
HDAC6-214ENST00000465269 MYO1BO43795 1136 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 KCNJ4P48050 445 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 GTF2A2P52657 109 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 HELBQ8NG08 1087 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-214ENST00000465269 STAP2Q9UGK3 403 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 MAP3K2Q9Y2U5 619 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 MYH3P11055 1940 aa19.33■□□□□ 0.68
HDAC6-214ENST00000465269 IRS2Q9Y4H2 1338 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 BTBD19C9JJ37 291 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 TLR2O60603 784 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 TAF5LO75529 589 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 CCL5P13501 91 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
HDAC6-214ENST00000465269 MNX1P50219 401 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-214ENST00000465269 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
HDAC6-214ENST00000465269 TRIM47Q96LD4 638 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 TEPSINQ96N21 525 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 TMEM39BQ9GZU3 492 aa19.32■□□□□ 0.68
HDAC6-214ENST00000465269 CHRNDQ07001 517 aa19.31■□□□□ 0.68
HDAC6-214ENST00000465269 KIF22Q14807 665 aa19.31■□□□□ 0.68
HDAC6-214ENST00000465269 Q7L0L9 218 aa19.31■□□□□ 0.68
HDAC6-214ENST00000465269 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
HDAC6-214ENST00000465269 ZNF70Q9UC06 446 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-214ENST00000465269 CPA4Q9UI42 421 aa19.31■□□□□ 0.68
HDAC6-214ENST00000465269 TCP10L2B9ZVM9 353 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 ITGA6P23229 1130 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 GJA8P48165 433 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 UBE3BQ7Z3V4 1068 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 ANKRD2Q9GZV1 360 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 NR2E3Q9Y5X4 410 aa19.3■□□□□ 0.68
HDAC6-214ENST00000465269 LAMA2P24043 3122 aaKnown RBP19.29■□□□□ 0.68
HDAC6-214ENST00000465269 PSMC4P43686 418 aa19.29■□□□□ 0.68
HDAC6-214ENST00000465269 MAP3K9P80192 1104 aa19.29■□□□□ 0.68
HDAC6-214ENST00000465269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.29■□□□□ 0.68
HDAC6-214ENST00000465269 RNF208Q9H0X6 261 aa19.29■□□□□ 0.68
HDAC6-214ENST00000465269 FARP2O94887 1054 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-214ENST00000465269 GJB1P08034 283 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 OSBPP22059 807 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 GRK4P32298 578 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 SPDYE2Q495Y8 402 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 MPHOSPH8Q99549 860 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 BIN2Q9UBW5 565 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-214ENST00000465269 SRRDQ9UH36 339 aa19.28■□□□□ 0.68
HDAC6-214ENST00000465269 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms