RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GRM2Q14416 872 aa7.12□□□□□ -1.27
CLK1-208ENST00000464454 KLHL23Q8NBE8 558 aa7.12□□□□□ -1.27
CLK1-208ENST00000464454 OSGEPQ9NPF4 335 aa7.12□□□□□ -1.27
CLK1-208ENST00000464454 MSTNO14793 375 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 FSCN2O14926 492 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 ITPKAP23677 461 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 ITGAEP38570 1179 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 IKBKEQ14164 716 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 SETDB1Q15047 1291 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 ADAMTSL4Q6UY14 1074 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 BCO2Q9BYV7 579 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
CLK1-208ENST00000464454 ABCB6Q9NP58 842 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 SEC31BQ9NQW1 1179 aa7.11□□□□□ -1.27
CLK1-208ENST00000464454 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 METTL12A8MUP2 240 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 C9orf172C9J069 976 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 DEAF1O75398 565 aaPredicted RBP7.1□□□□□ -1.27
CLK1-208ENST00000464454 CDC25BP30305 580 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 GRIA4P48058 902 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 NRG1Q02297 640 aaPredicted RBP7.1□□□□□ -1.27
CLK1-208ENST00000464454 TXNDC11Q6PKC3 985 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 IGF2-ASQ6U949 168 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 PI16Q6UXB8 463 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 RGS22Q8NE09 1264 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 DDX54Q8TDD1 881 aaKnown RBP7.1□□□□□ -1.27
CLK1-208ENST00000464454 SOX17Q9H6I2 414 aaPredicted RBP7.1□□□□□ -1.27
CLK1-208ENST00000464454 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
CLK1-208ENST00000464454 KRBA1A5PL33 1030 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 DLL1O00548 723 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 GNA15P30679 374 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 GSTT1P30711 240 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 C19orf57Q0VDD7 668 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 GRIK4Q16099 956 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
CLK1-208ENST00000464454 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 FBXO33Q7Z6M2 555 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 GLIS3Q8NEA6 775 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
CLK1-208ENST00000464454 ESRRAP11474 423 aaPredicted RBP7.08□□□□□ -1.28
CLK1-208ENST00000464454 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
CLK1-208ENST00000464454 FCGRTP55899 365 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 SPRED3Q2MJR0 410 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 LENG1Q96BZ8 264 aaPredicted RBP7.08□□□□□ -1.28
CLK1-208ENST00000464454 MRPL18Q9H0U6 180 aaKnown RBP7.08□□□□□ -1.28
CLK1-208ENST00000464454 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 FAM8A1Q9UBU6 413 aa7.08□□□□□ -1.28
CLK1-208ENST00000464454 XPCQ01831 940 aaPredicted RBP7.07□□□□□ -1.28
CLK1-208ENST00000464454 ZNF326Q5BKZ1 582 aaKnown RBP7.07□□□□□ -1.28
CLK1-208ENST00000464454 DUSP9Q99956 384 aaKnown RBP7.07□□□□□ -1.28
CLK1-208ENST00000464454 CARD10Q9BWT7 1032 aa7.07□□□□□ -1.28
CLK1-208ENST00000464454 BCL2L13Q9BXK5 485 aa7.07□□□□□ -1.28
CLK1-208ENST00000464454 USP21Q9UK80 565 aa7.07□□□□□ -1.28
CLK1-208ENST00000464454 SOX1O00570 391 aaPredicted RBP7.06□□□□□ -1.28
CLK1-208ENST00000464454 B3GALT4O96024 378 aa7.06□□□□□ -1.28
CLK1-208ENST00000464454 SELPP16109 830 aa7.06□□□□□ -1.28
CLK1-208ENST00000464454 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
CLK1-208ENST00000464454 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
CLK1-208ENST00000464454 GALNT11Q8NCW6 608 aa7.06□□□□□ -1.28
CLK1-208ENST00000464454 PPM1HQ9ULR3 514 aa7.06□□□□□ -1.28
CLK1-208ENST00000464454 ADAM23O75077 832 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 PSMD2Q13200 908 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 KLHDC7BQ96G42 594 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 OSBPL7Q9BZF2 842 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 PARP2Q9UGN5 583 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
CLK1-208ENST00000464454 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 CHRNA4P43681 627 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 DAB2P98082 770 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 GSTM4Q03013 218 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 DUOXA2Q1HG44 320 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 FOXD4L6Q3SYB3 417 aaPredicted RBP7.04□□□□□ -1.28
CLK1-208ENST00000464454 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
CLK1-208ENST00000464454 FOXD4L3Q6VB84 417 aaPredicted RBP7.04□□□□□ -1.28
CLK1-208ENST00000464454 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 MRS2Q9HD23 443 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
CLK1-208ENST00000464454 TM4SF5O14894 197 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 CYP11A1P05108 521 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 USP17L7P0C7H9 530 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 NLRP12P59046 1061 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 HNRNPUQ00839 825 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLK1-208ENST00000464454 AP3B2Q13367 1082 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 MBTPS1Q14703 1052 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 TMC4Q7Z404 712 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 ANKRD24Q8TF21 1146 aa7.03□□□□□ -1.28
CLK1-208ENST00000464454 GIPC2Q8TF65 315 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms