RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TIGD1Q96MW7 591 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF830Q96NB3 372 aaPredicted RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 DNAJC2Q99543 621 aaKnown RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 SRRTQ9BXP5 876 aaKnown RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 UPF3BQ9BZI7 483 aaKnown RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 CLSTN2Q9H4D0 955 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 ZSCAN16Q9H4T2 348 aaPredicted RBP8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 IMPACTQ9P2X3 320 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 CTNNA3Q9UI47 895 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 MTMR6Q9Y217 621 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 EXOC6BQ9Y2D4 811 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 FMN2Q9NZ56 1722 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 TECPR2O15040 1411 aa8.45□□□□□ -1.06
CLSTN1-204ENST00000464286 SETD1AO15047 1707 aaKnown RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 VPS37CA5D8V6 355 aaPredicted RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 LILRB3O75022 631 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 HOXB7P09629 217 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 KCNJ6P48051 423 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 RBM6P78332 1123 aaKnown RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 NCBP1Q09161 790 aaKnown RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 GPS2Q13227 327 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 QPCTQ16769 361 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 LARP1BQ659C4 914 aaKnown RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 ZSCAN25Q6NSZ9 544 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 NOL8Q76FK4 1167 aaKnown RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 PLA2G4DQ86XP0 818 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 TICAM2Q86XR7 235 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 HPS1Q92902 700 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 SPATA32Q96LK8 384 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 ARID3AQ99856 593 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 HYPKQ9NX55 129 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 CLIP2Q9UDT6 1046 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 CPS1P31327 1500 aa8.44□□□□□ -1.06
CLSTN1-204ENST00000464286 LRRC37A3O60309 1634 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 RICTORQ6R327 1708 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 SLU7O95391 586 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 CASTP20810 708 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 PTGS1P23219 599 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 KCNJ4P48050 445 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 FLIIQ13045 1269 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 STX1AQ16623 288 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 RUFY3Q7L099 469 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 CCDC186Q7Z3E2 898 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 NME9Q86XW9 330 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 CLASRPQ8N2M8 674 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 SPC24Q8NBT2 197 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 CCDC150Q8NCX0 1101 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 LSG1Q9H089 658 aaKnown RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 KCNF1Q9H3M0 494 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 ANO10Q9NW15 660 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 PYCARDQ9ULZ3 195 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
CLSTN1-204ENST00000464286 BECN2A8MW95 431 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 MYO1BO43795 1136 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 SURF6O75683 361 aaKnown RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 CTHP32929 405 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF165P49910 485 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 TUBB4BP68371 445 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 FGD1P98174 961 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 DNM1Q05193 864 aaKnown RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 EIF4A2Q14240 407 aaKnown RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 TERF2Q15554 542 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 FILIP1Q7Z7B0 1213 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 RHPN1Q8TCX5 695 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 JAKMIP1Q96N16 626 aaKnown RBP8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 CBX8Q9HC52 389 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 ECHDC1Q9NTX5 307 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
CLSTN1-204ENST00000464286 AGLP35573 1532 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 SBNO1A3KN83 1393 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 FLT4P35916 1363 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 KDRP35968 1356 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 RFX7Q2KHR2 1363 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 ANO6Q4KMQ2 910 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 BLOC1S2Q6QNY1 142 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 CCDC73Q6ZRK6 1079 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 CCDC83Q8IWF9 413 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms