RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
CD46-211ENST00000464082 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
CD46-211ENST00000464082 IL22RA1Q8N6P7 574 aa8.43□□□□□ -1.06
CD46-211ENST00000464082 MIA2Q96PC5 1412 aa8.43□□□□□ -1.06
CD46-211ENST00000464082 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
CD46-211ENST00000464082 RNF17Q9BXT8 1623 aaKnown RBP8.43□□□□□ -1.06
CD46-211ENST00000464082 RASA1P20936 1047 aa8.42□□□□□ -1.06
CD46-211ENST00000464082 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
CD46-211ENST00000464082 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
CD46-211ENST00000464082 PLD4Q96BZ4 506 aa8.42□□□□□ -1.06
CD46-211ENST00000464082 MYO3AQ8NEV4 1616 aa8.42□□□□□ -1.06
CD46-211ENST00000464082 EIF2AK4Q9P2K8 1649 aaKnown RBP8.42□□□□□ -1.06
CD46-211ENST00000464082 CEP152O94986 1710 aa8.41□□□□□ -1.06
CD46-211ENST00000464082 TCOF1Q13428 1488 aaKnown RBP8.41□□□□□ -1.06
CD46-211ENST00000464082 GSC2O15499 205 aa8.41□□□□□ -1.06
CD46-211ENST00000464082 SPINK2P20155 84 aa8.41□□□□□ -1.06
CD46-211ENST00000464082 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
CD46-211ENST00000464082 USP20Q9Y2K6 914 aa8.41□□□□□ -1.06
CD46-211ENST00000464082 CNTLNQ9NXG0 1405 aa8.4□□□□□ -1.06
CD46-211ENST00000464082 ATP9BO43861 1147 aa8.4□□□□□ -1.06
CD46-211ENST00000464082 NRLP54845 237 aa8.4□□□□□ -1.06
CD46-211ENST00000464082 ARMC10Q8N2F6 343 aa8.4□□□□□ -1.06
CD46-211ENST00000464082 TLR7Q9NYK1 1049 aaKnown RBP8.4□□□□□ -1.06
CD46-211ENST00000464082 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
CD46-211ENST00000464082 DHX29Q7Z478 1369 aaKnown RBP8.39□□□□□ -1.07
CD46-211ENST00000464082 ARSDP51689 593 aa8.39□□□□□ -1.07
CD46-211ENST00000464082 HSPA2P54652 639 aa8.39□□□□□ -1.07
CD46-211ENST00000464082 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
CD46-211ENST00000464082 ZC3H13Q5T200 1668 aaKnown RBP8.39□□□□□ -1.07
CD46-211ENST00000464082 DEPDC5O75140 1603 aa8.39□□□□□ -1.07
CD46-211ENST00000464082 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
CD46-211ENST00000464082 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 ABCC5O15440 1437 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 PTPRKQ15262 1439 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 MICAL2O94851 1124 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 WISP1O95388 367 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 SIK1P57059 783 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 NFIAQ12857 509 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 DGKZQ13574 1117 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 NSUN5Q96P11 429 aaKnown RBP8.38□□□□□ -1.07
CD46-211ENST00000464082 KRTAP4-9Q9BYQ8 210 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 KDM5DQ9BY66 1539 aa8.38□□□□□ -1.07
CD46-211ENST00000464082 NPATQ14207 1427 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 DHX15O43143 795 aaKnown RBP8.37□□□□□ -1.07
CD46-211ENST00000464082 SEC13P55735 322 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 TRIM42Q8IWZ5 723 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
CD46-211ENST00000464082 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 CEP170BQ9Y4F5 1589 aaPredicted RBP8.36□□□□□ -1.07
CD46-211ENST00000464082 HMX2A2RU54 273 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 OPLAHO14841 1288 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 HDGFL1Q5TGJ6 251 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 C7orf69Q9H7B7 122 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
CD46-211ENST00000464082 DAPK1P53355 1430 aa8.36□□□□□ -1.07
CD46-211ENST00000464082 ABCC3O15438 1527 aa8.35□□□□□ -1.07
CD46-211ENST00000464082 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
CD46-211ENST00000464082 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
CD46-211ENST00000464082 POLR1AO95602 1720 aaPredicted RBP8.35□□□□□ -1.07
CD46-211ENST00000464082 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
CD46-211ENST00000464082 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
CD46-211ENST00000464082 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
CD46-211ENST00000464082 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
CD46-211ENST00000464082 PZPP20742 1482 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 MMP20O60882 483 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 XYLBO75191 536 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 WNT11O96014 354 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 GRIK1P39086 918 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 GGT6Q6P531 493 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 INTS5Q6P9B9 1019 aaKnown RBP8.34□□□□□ -1.07
CD46-211ENST00000464082 MAP4K3Q8IVH8 894 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 KCNK4Q9NYG8 393 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 VWDEQ8N2E2 1590 aa8.34□□□□□ -1.07
CD46-211ENST00000464082 ADGRL2O95490 1459 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 KIF3BO15066 747 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 EGFRP00533 1210 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 GHRHP01286 108 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 RNF43Q68DV7 783 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 SPATA31D1Q6ZQQ2 1576 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
CD46-211ENST00000464082 NEURL4Q96JN8 1562 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 LINC01387J3KSC0 135 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 PSAPP07602 524 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 IGFBP4P22692 258 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 JAG1P78504 1218 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 TXNDC11Q6PKC3 985 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 ACAD11Q709F0 780 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 UTP4Q969X6 686 aaKnown RBP8.32□□□□□ -1.08
CD46-211ENST00000464082 PPME1Q9Y570 386 aa8.32□□□□□ -1.08
CD46-211ENST00000464082 UBR1Q8IWV7 1749 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms