RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TPSG1Q9NRR2 321 aa5.76□□□□□ -1.49
SCFD1-204ENST00000463622 ELNP15502 786 aa5.75□□□□□ -1.49
SCFD1-204ENST00000463622 WFDC8Q8IUA0 241 aa5.75□□□□□ -1.49
SCFD1-204ENST00000463622 FMR1NBQ8N0W7 255 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-204ENST00000463622 SEMA6BQ9H3T3 888 aa5.75□□□□□ -1.49
SCFD1-204ENST00000463622 FRRS1LQ9P0K9 344 aa5.75□□□□□ -1.49
SCFD1-204ENST00000463622 C3P01024 1663 aa5.75□□□□□ -1.49
SCFD1-204ENST00000463622 GHRHP01286 108 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 CYP2E1P05181 493 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 ITGB7P26010 798 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 MED1Q15648 1581 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 FMN1Q68DA7 1419 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 NUDT16Q96DE0 195 aaKnown RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 ARHGAP5Q13017 1502 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 A6NHS1 94 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 ARID4AP29374 1257 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 GTF3C2Q8WUA4 911 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-204ENST00000463622 NACC1Q96RE7 527 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 ARID3AQ99856 593 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 USP21Q9UK80 565 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 TRIM33Q9UPN9 1127 aa5.74□□□□□ -1.49
SCFD1-204ENST00000463622 SHANK2Q9UPX8 1470 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 SPAG9O60271 1321 aaKnown RBP5.73□□□□□ -1.49
SCFD1-204ENST00000463622 C9orf172C9J069 976 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 DEAF1O75398 565 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-204ENST00000463622 SSFA2P28290 1259 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 DNM1Q05193 864 aaKnown RBP5.73□□□□□ -1.49
SCFD1-204ENST00000463622 MBTPS1Q14703 1052 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 ANKLE2Q86XL3 938 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 IL22RA1Q8N6P7 574 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 ABTB2Q8N961 1025 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 OR13H1Q8NG92 308 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 EDEM1Q92611 657 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 FAM13BQ9NYF5 915 aa5.73□□□□□ -1.49
SCFD1-204ENST00000463622 CLIP1P30622 1438 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 CEP162Q5TB80 1403 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 MPSTP25325 297 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 HNRNPMP52272 730 aaKnown RBP eCLIP5.72□□□□□ -1.492e-6■■■■□ 19.7
SCFD1-204ENST00000463622 ATP11AP98196 1134 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 RSPO4Q2I0M5 234 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-204ENST00000463622 TTC39BQ5VTQ0 682 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-204ENST00000463622 GGT6Q6P531 493 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 ADAMTSL4Q6UY14 1074 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 TTC9Q92623 222 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 LENG1Q96BZ8 264 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-204ENST00000463622 TMEM63CQ9P1W3 806 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 CPS1P31327 1500 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 ARHGAP35Q9NRY4 1499 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 ABCA6Q8N139 1617 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 PPP1R15AO75807 674 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-204ENST00000463622 CDC25BP30305 580 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 SOX18P35713 384 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 HELQQ8TDG4 1101 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 GGNBP2Q9H3C7 697 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 ANO2Q9NQ90 1003 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 KANSL3Q9P2N6 904 aa5.72□□□□□ -1.49
SCFD1-204ENST00000463622 FNDC3AQ9Y2H6 1198 aaKnown RBP5.72□□□□□ -1.49
SCFD1-204ENST00000463622 KIAA1107Q9UPP5 1409 aa5.71□□□□□ -1.49
SCFD1-204ENST00000463622 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 FBXO11Q86XK2 927 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 THEMISQ8N1K5 641 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-204ENST00000463622 LACRTQ9GZZ8 138 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 RBSNQ9H1K0 784 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 ELP3Q9H9T3 547 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 ABI2Q9NYB9 513 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-204ENST00000463622 CNTN3Q9P232 1028 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.5
SCFD1-204ENST00000463622 EIF1AXP47813 144 aaKnown RBP5.7□□□□□ -1.5
SCFD1-204ENST00000463622 NRG1Q02297 640 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-204ENST00000463622 C8orf34Q49A92 452 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 NOM1Q5C9Z4 860 aaKnown RBP5.7□□□□□ -1.5
SCFD1-204ENST00000463622 CEP135Q66GS9 1140 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 TXNDC11Q6PKC3 985 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 TXNRD3Q86VQ6 643 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 KIF14Q15058 1648 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 ALKQ9UM73 1620 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 ABCC1P33527 1531 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 ALX3O95076 343 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 IREB2P48200 963 aaKnown RBP5.7□□□□□ -1.5
SCFD1-204ENST00000463622 HYAL2Q12891 473 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 AAMPQ13685 434 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 ZNF438Q7Z4V0 828 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 RASSF4Q9H2L5 321 aa5.7□□□□□ -1.5
SCFD1-204ENST00000463622 A2MP01023 1474 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 KIDINS220Q9ULH0 1771 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 TRPA1O75762 1119 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 ABL1P00519 1130 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 PDGFAP04085 211 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 HOXD8P13378 290 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-204ENST00000463622 ACPPP15309 386 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 NCAPG2Q86XI2 1143 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 C1orf127Q8N9H9 656 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 SPACA7Q96KW9 195 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 CEP170BQ9Y4F5 1589 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-204ENST00000463622 TNRQ92752 1358 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 MED14O60244 1454 aa5.69□□□□□ -1.5
SCFD1-204ENST00000463622 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms