RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 SOX13Q9UN79 622 aa7.06□□□□□ -1.28
HERC4-208ENST00000463478 F6X3S4 739 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 M0R082 166 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 OIP5O43482 229 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 BCRP11274 1271 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 CDC27P30260 824 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 CDC25BP30305 580 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 CABP4P57796 275 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 PCDH1Q08174 1060 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 MAP3K11Q16584 847 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 ZNF394Q53GI3 561 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 KANK3Q6NY19 840 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 CHSY3Q70JA7 882 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 USP48Q86UV5 1035 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 ZNF417Q8TAU3 575 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 TTC9Q92623 222 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 ZNF587Q96SQ5 575 aaPredicted RBP7.05□□□□□ -1.28
HERC4-208ENST00000463478 CEP44Q9C0F1 390 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 ADAM19Q9H013 955 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 CCSER2Q9H7U1 834 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 PCDHGB7Q9Y5F8 929 aa7.05□□□□□ -1.28
HERC4-208ENST00000463478 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 LILRB5O75023 590 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 CELA3AP09093 270 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 EPHA1P21709 976 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
HERC4-208ENST00000463478 ZNF385CQ66K41 422 aaPredicted RBP7.04□□□□□ -1.28
HERC4-208ENST00000463478 LYPD4Q6UWN0 246 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 C20orf204Q6ZNR8 217 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 C8orf86Q6ZUL3 223 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 VN1R5Q7Z5H4 357 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 BTBD6Q96KE9 485 aa7.04□□□□□ -1.28
HERC4-208ENST00000463478 TRIM56Q9BRZ2 755 aaKnown RBP7.04□□□□□ -1.28
HERC4-208ENST00000463478 NOC4LQ9BVI4 516 aaKnown RBP7.04□□□□□ -1.28
HERC4-208ENST00000463478 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
HERC4-208ENST00000463478 AFF1P51825 1210 aaKnown RBP7.03□□□□□ -1.28
HERC4-208ENST00000463478 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
HERC4-208ENST00000463478 IKBKEQ14164 716 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 GRIK5Q16478 980 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 ERMP1Q7Z2K6 904 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 NECAB3Q96P71 396 aaPredicted RBP7.03□□□□□ -1.28
HERC4-208ENST00000463478 TGIF2Q9GZN2 237 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 COPRSQ9NQ92 184 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 KBTBD4Q9NVX7 518 aa7.03□□□□□ -1.28
HERC4-208ENST00000463478 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.03□□□□□ -1.28
HERC4-208ENST00000463478 ENC1O14682 589 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 MAP3K10Q02779 954 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 PPP2R3AQ06190 1150 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 TXNDC11Q6PKC3 985 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 RELL1Q8IUW5 271 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 CACTIN-AS1Q8N1I8 211 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 WHAMMQ8TF30 809 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 SLC7A3Q8WY07 619 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 ACBD3Q9H3P7 528 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
HERC4-208ENST00000463478 H3BRJ5 948 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 LINC01387J3KSC0 135 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 B3GALT4O96024 378 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 ESRRAP11474 423 aaPredicted RBP7.01□□□□□ -1.29
HERC4-208ENST00000463478 RACK1P63244 317 aaKnown RBP7.01□□□□□ -1.29
HERC4-208ENST00000463478 ZNF423Q2M1K9 1284 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 WFDC8Q8IUA0 241 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 SVOPQ8N4V2 548 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 DDX41Q9UJV9 622 aaKnown RBP7.01□□□□□ -1.29
HERC4-208ENST00000463478 PPME1Q9Y570 386 aa7.01□□□□□ -1.29
HERC4-208ENST00000463478 MINDY4BA8MYZ0 360 aa7□□□□□ -1.29
HERC4-208ENST00000463478 PAGE1O75459 146 aa7□□□□□ -1.29
HERC4-208ENST00000463478 RLBP1P12271 317 aa7□□□□□ -1.29
HERC4-208ENST00000463478 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
HERC4-208ENST00000463478 BAG6P46379 1132 aa7□□□□□ -1.29
HERC4-208ENST00000463478 LIG3P49916 1009 aa7□□□□□ -1.29
HERC4-208ENST00000463478 PWP1Q13610 501 aa7□□□□□ -1.29
HERC4-208ENST00000463478 NAALADL2Q58DX5 795 aa7□□□□□ -1.29
HERC4-208ENST00000463478 MSL1Q68DK7 614 aa7□□□□□ -1.29
HERC4-208ENST00000463478 TTBK2Q6IQ55 1244 aa7□□□□□ -1.29
HERC4-208ENST00000463478 FAM117BQ6P1L5 589 aa7□□□□□ -1.29
HERC4-208ENST00000463478 NEDD1Q8NHV4 660 aa7□□□□□ -1.29
HERC4-208ENST00000463478 C8orf37Q96NL8 207 aa7□□□□□ -1.29
HERC4-208ENST00000463478 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
HERC4-208ENST00000463478 SRA1Q9HD15 236 aaKnown RBP7□□□□□ -1.29
HERC4-208ENST00000463478 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
HERC4-208ENST00000463478 SOX1O00570 391 aaPredicted RBP6.99□□□□□ -1.29
HERC4-208ENST00000463478 ARHGEF15O94989 841 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 TNNI2P48788 182 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 PCNX4Q63HM2 1172 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 HGSNATQ68CP4 663 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
HERC4-208ENST00000463478 RRAGCQ9HB90 399 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 CAPN10Q9HC96 672 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 TLR6Q9Y2C9 796 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 SAMM50Q9Y512 469 aa6.99□□□□□ -1.29
HERC4-208ENST00000463478 LMNB1P20700 586 aa6.98□□□□□ -1.29
HERC4-208ENST00000463478 ARL4DP49703 201 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms