RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RILPL2Q969X0 211 aa11.92□□□□□ -0.5
PTPRD-207ENST00000463477 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
PTPRD-207ENST00000463477 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
PTPRD-207ENST00000463477 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
PTPRD-207ENST00000463477 GOLGA6L3A6NEY3 463 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 WTIPA6NIX2 430 aaPredicted RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 TSHZ3Q63HK5 1081 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 GPR101Q96P66 508 aaPredicted RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 SGSM2O43147 1006 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 HSPA4P34932 840 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 DOK7Q18PE1 504 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
PTPRD-207ENST00000463477 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 CNNM1Q9NRU3 951 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 HACL1Q9UJ83 578 aa11.91□□□□□ -0.5
PTPRD-207ENST00000463477 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 RAD50Q92878 1312 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 G3V3G9 751 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 ECE2O60344 883 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 RAD17O75943 681 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
PTPRD-207ENST00000463477 GPATCH3Q96I76 525 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
PTPRD-207ENST00000463477 ANO2Q9NQ90 1003 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 BRPF3Q9ULD4 1205 aa11.9□□□□□ -0.5
PTPRD-207ENST00000463477 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 TAF5LO75529 589 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
PTPRD-207ENST00000463477 MRE11P49959 708 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 SCNN1DP51172 638 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 NEK4P51957 841 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 FSTL1Q12841 308 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 KLHL40Q2TBA0 621 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
PTPRD-207ENST00000463477 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
PTPRD-207ENST00000463477 DPF2Q92785 391 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 COA1Q9GZY4 146 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 KCNQ5Q9NR82 932 aa11.89□□□□□ -0.51
PTPRD-207ENST00000463477 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
PTPRD-207ENST00000463477 EPHX2P34913 555 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 KCNJ4P48050 445 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 PTPN12Q05209 780 aaKnown RBP11.88□□□□□ -0.51
PTPRD-207ENST00000463477 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 TXNRD3Q86VQ6 643 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 ECHDC1Q9NTX5 307 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
PTPRD-207ENST00000463477 SNAP23O00161 211 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 PSMD14O00487 310 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
PTPRD-207ENST00000463477 EPS15P42566 896 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 OS9Q13438 667 aaPredicted RBP11.87□□□□□ -0.51
PTPRD-207ENST00000463477 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 TMX3Q96JJ7 454 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 SCN4AP35499 1836 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 EYA2O00167 538 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 HIP1O00291 1037 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
PTPRD-207ENST00000463477 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
PTPRD-207ENST00000463477 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 KLHDC4Q8TBB5 520 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
PTPRD-207ENST00000463477 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
PTPRD-207ENST00000463477 PDE8BO95263 885 aa11.86□□□□□ -0.51
PTPRD-207ENST00000463477 XRCC6P12956 609 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPRD-207ENST00000463477 USP50Q70EL3 339 aaPredicted RBP11.86□□□□□ -0.51
PTPRD-207ENST00000463477 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
PTPRD-207ENST00000463477 KCNB2Q92953 911 aa11.86□□□□□ -0.51
PTPRD-207ENST00000463477 EVI5LQ96CN4 794 aa11.86□□□□□ -0.51
PTPRD-207ENST00000463477 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
PTPRD-207ENST00000463477 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
PTPRD-207ENST00000463477 CNOT7Q9UIV1 285 aaKnown RBP11.86□□□□□ -0.51
PTPRD-207ENST00000463477 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
PTPRD-207ENST00000463477 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 CIAO1O76071 339 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 IFIT2P09913 472 aaKnown RBP11.85□□□□□ -0.51
PTPRD-207ENST00000463477 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 POTEJP0CG39 1038 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 KLRK1P26718 216 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPRD-207ENST00000463477 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 VGLL2Q8N8G2 317 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms