RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
EPHA4-210ENST00000463446 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 PPIP5K2O43314 1243 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 BAG3O95817 575 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 PLCG2P16885 1265 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 IARSP41252 1262 aaKnown RBP8.94□□□□□ -0.98
EPHA4-210ENST00000463446 EIF6P56537 245 aaKnown RBP8.94□□□□□ -0.98
EPHA4-210ENST00000463446 STRIP1Q5VSL9 837 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 ARHGAP27Q6ZUM4 889 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 KBTBD3Q8NAB2 608 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 FSD1Q9BTV5 496 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 HELLSQ9NRZ9 838 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 DIAPH3Q9NSV4 1193 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 HDAC9Q9UKV0 1011 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 ZNRF3Q9ULT6 936 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 SALL1Q9NSC2 1324 aa8.94□□□□□ -0.98
EPHA4-210ENST00000463446 CDC45O75419 566 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 LDHBP07195 334 aaKnown RBP8.93□□□□□ -0.98
EPHA4-210ENST00000463446 GNAT2P19087 354 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 LMNB1P20700 586 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 RPS12P25398 132 aaKnown RBP8.93□□□□□ -0.98
EPHA4-210ENST00000463446 PDE4AP27815 886 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 GYG1P46976 350 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 HDLBPQ00341 1268 aaKnown RBP8.93□□□□□ -0.98
EPHA4-210ENST00000463446 UBE3CQ15386 1083 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 PI4K2BQ8TCG2 481 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 DNAJC2Q99543 621 aaKnown RBP8.93□□□□□ -0.98
EPHA4-210ENST00000463446 SALL3Q9BXA9 1300 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 RFX7Q2KHR2 1363 aa8.93□□□□□ -0.98
EPHA4-210ENST00000463446 ZNF609O15014 1411 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 FAM205AQ6ZU69 1335 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
EPHA4-210ENST00000463446 GOLIM4O00461 696 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 RIMBP2O15034 1052 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 RNF113AO15541 343 aaKnown RBP8.92□□□□□ -0.98
EPHA4-210ENST00000463446 SDSP20132 328 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 MCCP23508 829 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 MCMDC2Q4G0Z9 681 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 SLC9C2Q5TAH2 1124 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 AGBL3Q8NEM8 1001 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 HMG20BQ9P0W2 317 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 CTNNA3Q9UI47 895 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
EPHA4-210ENST00000463446 KIF13BQ9NQT8 1826 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-210ENST00000463446 RAD50Q92878 1312 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 ADORA1P30542 326 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 PHKA1P46020 1223 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 NT5C2P49902 561 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 DZIP1Q86YF9 867 aaKnown RBP8.91□□□□□ -0.98
EPHA4-210ENST00000463446 AMOTL1Q8IY63 956 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 FAM163AQ96GL9 167 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-210ENST00000463446 NACAP1Q9BZK3 213 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 RAI14Q9P0K7 980 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
EPHA4-210ENST00000463446 MYO1BO43795 1136 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 ECE2O60344 883 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 IDH1O75874 414 aaKnown RBP8.9□□□□□ -0.98
EPHA4-210ENST00000463446 CYP2E1P05181 493 aaPredicted RBP8.9□□□□□ -0.98
EPHA4-210ENST00000463446 VIL1P09327 827 aaKnown RBP8.9□□□□□ -0.98
EPHA4-210ENST00000463446 MCAMP43121 646 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 ZAP70P43403 619 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 GTF2IP78347 998 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 RASGRF1Q13972 1273 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 MFSD14BQ5SR56 506 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 RNF20Q5VTR2 975 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 CIAPIN1Q6FI81 312 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.98
EPHA4-210ENST00000463446 HHIPL2Q6UWX4 724 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 DPF2Q92785 391 aa8.9□□□□□ -0.98
EPHA4-210ENST00000463446 H7C1D1 291 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 CHMLP26374 656 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 CHAF1AQ13111 956 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-210ENST00000463446 AOC3Q16853 763 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 DOK7Q18PE1 504 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 NLGN2Q8NFZ4 835 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 APPBP2Q92624 585 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 TEKT1Q969V4 418 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 ZNF287Q9HBT7 754 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 ZNF277Q9NRM2 450 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-210ENST00000463446 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
EPHA4-210ENST00000463446 SERPINA10Q9UK55 444 aa8.89□□□□□ -0.99
EPHA4-210ENST00000463446 ANKRD31Q8N7Z5 1873 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 FZD9O00144 591 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 SLC3A2P08195 630 aaKnown RBP8.88□□□□□ -0.99
EPHA4-210ENST00000463446 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-210ENST00000463446 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 TXNRD3Q86VQ6 643 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 GPC2Q8N158 579 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 OTUD7AQ8TE49 926 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-210ENST00000463446 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 SNRKQ9NRH2 765 aa8.88□□□□□ -0.99
EPHA4-210ENST00000463446 LRP5O75197 1615 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 IRS2Q9Y4H2 1338 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 MAGEB6P1A0A0J9YX57 407 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms