RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 KCNB2Q92953 911 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 C16orf45Q96MC5 204 aaPredicted RBP10.21□□□□□ -0.77
SHQ1-203ENST00000463369 CNPY2Q9Y2B0 182 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.78
SHQ1-203ENST00000463369 EIF2S2P20042 333 aaKnown RBP10.21□□□□□ -0.78
SHQ1-203ENST00000463369 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.78
SHQ1-203ENST00000463369 SDE2Q6IQ49 451 aa10.21□□□□□ -0.78
SHQ1-203ENST00000463369 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.78
SHQ1-203ENST00000463369 STK31Q9BXU1 1019 aa10.21□□□□□ -0.78
SHQ1-203ENST00000463369 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.78
SHQ1-203ENST00000463369 ERICH4A6NGS2 130 aa10.2□□□□□ -0.78
SHQ1-203ENST00000463369 VAMP1P23763 118 aa10.2□□□□□ -0.78
SHQ1-203ENST00000463369 ERCC5P28715 1186 aaPredicted RBP10.2□□□□□ -0.78
SHQ1-203ENST00000463369 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
SHQ1-203ENST00000463369 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
SHQ1-203ENST00000463369 SMARCC1Q92922 1105 aaPredicted RBP10.2□□□□□ -0.78
SHQ1-203ENST00000463369 IL17RAQ96F46 866 aa10.2□□□□□ -0.78
SHQ1-203ENST00000463369 USP16Q9Y5T5 823 aa10.2□□□□□ -0.78
SHQ1-203ENST00000463369 CCDC186Q7Z3E2 898 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 TEX13AQ9BXU3 409 aaPredicted RBP10.19□□□□□ -0.78
SHQ1-203ENST00000463369 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.19□□□□□ -0.78
SHQ1-203ENST00000463369 RREB1Q92766 1687 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 CCDC192P0DO97 292 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 ZSCAN22P10073 491 aaPredicted RBP10.19□□□□□ -0.78
SHQ1-203ENST00000463369 C7P10643 843 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 CYP2C19P33261 490 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 CAMK2BQ13554 666 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 PTF1AQ7RTS3 328 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 TRIM34Q9BYJ4 488 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
SHQ1-203ENST00000463369 PALD1Q9ULE6 856 aa10.19□□□□□ -0.78
SHQ1-203ENST00000463369 TNS1Q9HBL0 1735 aaKnown RBP10.19□□□□□ -0.78
SHQ1-203ENST00000463369 ARFGEF2Q9Y6D5 1785 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 PTPRCP08575 1304 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 PYGBP11216 843 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 LRMPQ12912 555 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 MFSD10Q14728 455 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 CCDC144BQ3MJ40 725 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 MAF1Q9H063 256 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 PIF1Q9H611 641 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 NUP98P52948 1817 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 HNRNPH2P55795 449 aaKnown RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 PDIA6Q15084 440 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 CEP135Q66GS9 1140 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 ZSCAN25Q6NSZ9 544 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 G2E3Q7L622 706 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 DHX38Q92620 1227 aaKnown RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 ESYT1Q9BSJ8 1104 aa10.18□□□□□ -0.78
SHQ1-203ENST00000463369 DDX21Q9NR30 783 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 FEZ2Q9UHY8 353 aaPredicted RBP10.18□□□□□ -0.78
SHQ1-203ENST00000463369 NUP188Q5SRE5 1749 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 ATP10DQ9P241 1426 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 KIF4AO95239 1232 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 CEP85Q6P2H3 762 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 TANGO6Q9C0B7 1094 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 HYPKQ9NX55 129 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
SHQ1-203ENST00000463369 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
SHQ1-203ENST00000463369 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 SIK1P57059 783 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 FBXO38Q6PIJ6 1188 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 DNAJC10Q8IXB1 793 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 PPP1R12CQ9BZL4 782 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 NRBP1Q9UHY1 535 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ATP6V1DQ9Y5K8 247 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 STX6O43752 255 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 STARD3NLO95772 234 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ARID4AP29374 1257 aaPredicted RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 PDE1AP54750 535 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 DRC7Q8IY82 874 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ST7Q9NRC1 585 aa10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ZNF215Q9UL58 517 aaPredicted RBP10.16□□□□□ -0.78
SHQ1-203ENST00000463369 ANKRD36CQ5JPF3 1778 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 FIBPO43427 364 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 EIF3JO75822 258 aaKnown RBP10.15□□□□□ -0.78
SHQ1-203ENST00000463369 F13A1P00488 732 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 ANXA1P04083 346 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms