RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 PDGFDQ9GZP0 370 aaPredicted RBP6.4□□□□□ -1.39
TRA2B-207ENST00000463328 TMX1Q9H3N1 280 aa6.4□□□□□ -1.39
TRA2B-207ENST00000463328 HOMER2Q9NSB8 354 aa6.4□□□□□ -1.39
TRA2B-207ENST00000463328 CEP170BQ9Y4F5 1589 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 PPIP5K1Q6PFW1 1433 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 DIAPH1O60610 1272 aaKnown RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 PPFIA3O75145 1194 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 NOS2P35228 1153 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 GEMIN4P57678 1058 aaKnown RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 GRAMD1BQ3KR37 738 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 TEX19Q8NA77 164 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 ACAD8Q9UKU7 415 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 NRKQ7Z2Y5 1582 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 PRIM1P49642 420 aaKnown RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 EIF5P55010 431 aaKnown RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 FRS2Q8WU20 508 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 JARID2Q92833 1246 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-207ENST00000463328 SERINC2Q96SA4 455 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 FANCLQ9NW38 375 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 PHF8Q9UPP1 1060 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 ROBO2Q9HCK4 1378 aa6.39□□□□□ -1.39
TRA2B-207ENST00000463328 ANKARQ7Z5J8 1434 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 SCGB1D2O95969 90 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 ABL1P00519 1130 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 HOXC13P31276 330 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 CTHP32929 405 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 CLCN1P35523 988 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 TMPOP42166 694 aaKnown RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 RARSP54136 660 aaKnown RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 QPCTQ16769 361 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 DALRD3Q5D0E6 543 aaKnown RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 ESCO1Q5FWF5 840 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 PLPP6Q8IY26 295 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 MICALL1Q8N3F8 863 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 CDHR1Q96JP9 859 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 GGNBP2Q9H3C7 697 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 HMX1Q9NP08 348 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 LUZP4Q9P127 313 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 NALCNQ8IZF0 1738 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 LRRC7Q96NW7 1537 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 SENP3-EIF4A1A0A087X0R7 540 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 MAP3K7O43318 606 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 PIP5K1CO60331 668 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 MYL1P05976 194 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 POU3F3P20264 500 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 CRTC2Q53ET0 693 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 FAM83BQ5T0W9 1011 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 MSL1Q68DK7 614 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 FAM217BQ9NTX9 383 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 POLKQ9UBT6 870 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 ZNF142P52746 1687 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-207ENST00000463328 USP54Q70EL1 1684 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 TTC21AQ8NDW8 1320 aa6.38□□□□□ -1.39
TRA2B-207ENST00000463328 A0A1W2PRQ8 180 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 IPO5O00410 1097 aaKnown RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 AP1G2O75843 785 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 MYL3P08590 195 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 CCT2P78371 535 aaKnown RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 C20orf194Q5TEA3 1177 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 COG3Q96JB2 828 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 CNTN3Q9P232 1028 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 TRIM35Q9UPQ4 493 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 INPP5FQ9Y2H2 1132 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SSH2Q76I76 1423 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 XRN1Q8IZH2 1706 aaKnown RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 A6NCN8 305 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SPDYE16A6NNV3 312 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 LZTS3O60299 673 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 ABCB7O75027 752 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 ALDH1L1O75891 902 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 OSBPP22059 807 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SATB1Q01826 763 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 COL19A1Q14993 1142 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 TAF11Q15544 211 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 SPECC1Q5M775 1068 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-207ENST00000463328 KSR2Q6VAB6 950 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 IFNL3Q8IZI9 196 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 ITFG2Q969R8 447 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 RELTQ969Z4 430 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 CCDC34Q96HJ3 373 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 DAAM1Q9Y4D1 1078 aa6.37□□□□□ -1.39
TRA2B-207ENST00000463328 PTPRUQ92729 1446 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 PABPN1LA6NDY0 278 aaKnown RBP6.36□□□□□ -1.39
TRA2B-207ENST00000463328 RPN1P04843 607 aaKnown RBP6.36□□□□□ -1.39
TRA2B-207ENST00000463328 USP17L8P0C7I0 530 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 ADD2P35612 726 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 TNNT2P45379 298 aaPredicted RBP6.36□□□□□ -1.39
TRA2B-207ENST00000463328 MASP1P48740 699 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 ZNF132P52740 706 aa6.36□□□□□ -1.39
TRA2B-207ENST00000463328 NAP1L1P55209 391 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms