RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 NBPF12Q5TAG4 269 aaPredicted RBP25.93■■□□□ 1.74
PTPN18-208ENST00000462996 CCDC30Q5VVM6 783 aa25.93■■□□□ 1.74
PTPN18-208ENST00000462996 ANKRD2Q9GZV1 360 aa25.93■■□□□ 1.74
PTPN18-208ENST00000462996 PPP2R3BQ9Y5P8 575 aa25.93■■□□□ 1.74
PTPN18-208ENST00000462996 H7C1W4 665 aa25.92■■□□□ 1.74
PTPN18-208ENST00000462996 USP2O75604 605 aaPredicted RBP25.92■■□□□ 1.74
PTPN18-208ENST00000462996 COLQQ9Y215 455 aaPredicted RBP25.92■■□□□ 1.74
PTPN18-208ENST00000462996 AOX1Q06278 1338 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 CLRN2A0PK11 232 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 TESPA1A2RU30 521 aaPredicted RBP25.91■■□□□ 1.74
PTPN18-208ENST00000462996 NEURL1BA8MQ27 555 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 SNAP23O00161 211 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 ITGA6P23229 1130 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 SUPT20HL1Q3ZLR7 823 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 OTUD7BQ6GQQ9 843 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 UBE3BQ7Z3V4 1068 aa25.91■■□□□ 1.74
PTPN18-208ENST00000462996 PRMT6Q96LA8 375 aaPredicted RBP25.91■■□□□ 1.74
PTPN18-208ENST00000462996 IRS2Q9Y4H2 1338 aa25.9■■□□□ 1.74
PTPN18-208ENST00000462996 TSPYL6Q8N831 410 aa25.9■■□□□ 1.74
PTPN18-208ENST00000462996 ZNF333Q96JL9 665 aa25.9■■□□□ 1.74
PTPN18-208ENST00000462996 SPDYE2BA6NHP3 402 aa25.89■■□□□ 1.74
PTPN18-208ENST00000462996 F8W031 263 aaPredicted RBP25.89■■□□□ 1.74
PTPN18-208ENST00000462996 SPDYE6P0CI01 402 aa25.89■■□□□ 1.74
PTPN18-208ENST00000462996 IREB2P48200 963 aaKnown RBP25.89■■□□□ 1.74
PTPN18-208ENST00000462996 CHRNDQ07001 517 aa25.89■■□□□ 1.74
PTPN18-208ENST00000462996 CFAP100Q494V2 611 aa25.89■■□□□ 1.74
PTPN18-208ENST00000462996 MPHOSPH8Q99549 860 aa25.89■■□□□ 1.74
PTPN18-208ENST00000462996 KCNJ4P48050 445 aa25.88■■□□□ 1.73
PTPN18-208ENST00000462996 NEXNQ0ZGT2 675 aa25.88■■□□□ 1.73
PTPN18-208ENST00000462996 TMEM106CQ9BVX2 250 aa25.88■■□□□ 1.73
PTPN18-208ENST00000462996 APAF1O14727 1248 aa25.87■■□□□ 1.73
PTPN18-208ENST00000462996 ANKRD13AQ8IZ07 590 aa25.87■■□□□ 1.73
PTPN18-208ENST00000462996 PLA2G12BQ9BX93 195 aa25.87■■□□□ 1.73
PTPN18-208ENST00000462996 VEZTQ9HBM0 779 aa25.87■■□□□ 1.73
PTPN18-208ENST00000462996 CEP290O15078 2479 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 MYO1BO43795 1136 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 CSF1RP07333 972 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 RASA3Q14644 834 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 MS4A4AQ96JQ5 239 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 OTOFQ9HC10 1997 aa25.86■■□□□ 1.73
PTPN18-208ENST00000462996 CASP7P55210 303 aa25.85■■□□□ 1.73
PTPN18-208ENST00000462996 CALD1Q05682 793 aaKnown RBP25.85■■□□□ 1.73
PTPN18-208ENST00000462996 C15orf52Q6ZUT6 534 aaKnown RBP25.85■■□□□ 1.73
PTPN18-208ENST00000462996 OPTNQ96CV9 577 aa25.85■■□□□ 1.73
PTPN18-208ENST00000462996 CHMP4AQ9BY43 222 aa25.85■■□□□ 1.73
PTPN18-208ENST00000462996 ELP3Q9H9T3 547 aa25.85■■□□□ 1.73
PTPN18-208ENST00000462996 PTCH2Q9Y6C5 1203 aa25.85■■□□□ 1.73
PTPN18-208ENST00000462996 TAF5LO75529 589 aa25.84■■□□□ 1.73
PTPN18-208ENST00000462996 G2E3Q7L622 706 aa25.84■■□□□ 1.73
PTPN18-208ENST00000462996 HELBQ8NG08 1087 aaPredicted RBP25.84■■□□□ 1.73
PTPN18-208ENST00000462996 TRIOBPQ9H2D6 2365 aa25.83■■□□□ 1.73
PTPN18-208ENST00000462996 IL1R1P14778 569 aa25.83■■□□□ 1.73
PTPN18-208ENST00000462996 GCKRQ14397 625 aa25.83■■□□□ 1.73
PTPN18-208ENST00000462996 SLC9C1Q4G0N8 1177 aa25.83■■□□□ 1.73
PTPN18-208ENST00000462996 JAG2Q9Y219 1238 aa25.83■■□□□ 1.73
PTPN18-208ENST00000462996 FKBP1AP62942 108 aaKnown RBP25.82■■□□□ 1.72
PTPN18-208ENST00000462996 NBPF11Q86T75 865 aa25.82■■□□□ 1.72
PTPN18-208ENST00000462996 CNKSR2Q8WXI2 1034 aa25.82■■□□□ 1.72
PTPN18-208ENST00000462996 BRI3BPQ8WY22 251 aa25.82■■□□□ 1.72
PTPN18-208ENST00000462996 OTUD5Q96G74 571 aa25.81■■□□□ 1.72
PTPN18-208ENST00000462996 A0A1B0GUL6 1792 aa25.8■■□□□ 1.72
PTPN18-208ENST00000462996 H0YGN5 161 aa25.8■■□□□ 1.72
PTPN18-208ENST00000462996 RBM5P52756 815 aaKnown RBP eCLIP25.8■■□□□ 1.72
PTPN18-208ENST00000462996 SLC4A8Q2Y0W8 1093 aa25.8■■□□□ 1.72
PTPN18-208ENST00000462996 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.8■■□□□ 1.72
PTPN18-208ENST00000462996 RANBP2P49792 3224 aaKnown RBP25.8■■□□□ 1.72
PTPN18-208ENST00000462996 MYCP01106 439 aaPredicted RBP25.79■■□□□ 1.72
PTPN18-208ENST00000462996 TAF1CQ15572 869 aaPredicted RBP25.79■■□□□ 1.72
PTPN18-208ENST00000462996 CDAN1Q8IWY9 1227 aa25.79■■□□□ 1.72
PTPN18-208ENST00000462996 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
PTPN18-208ENST00000462996 ARHGEF6Q15052 776 aa25.78■■□□□ 1.72
PTPN18-208ENST00000462996 ZNF804AQ7Z570 1209 aa25.78■■□□□ 1.72
PTPN18-208ENST00000462996 ZFYVE28Q9HCC9 887 aa25.78■■□□□ 1.72
PTPN18-208ENST00000462996 ZNF70Q9UC06 446 aaPredicted RBP25.78■■□□□ 1.72
PTPN18-208ENST00000462996 CCL15-CCL14A0A0B4J2E2 113 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 ANKRD18BA2A2Z9 1011 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 CCL15Q16663 113 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 SPDYE2Q495Y8 402 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 FAM43AQ8N2R8 423 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 TEPSINQ96N21 525 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 ZSWIM8A7E2V4 1837 aa25.77■■□□□ 1.72
PTPN18-208ENST00000462996 DDX10Q13206 875 aaKnown RBP25.76■■□□□ 1.71
PTPN18-208ENST00000462996 SH3TC2Q8TF17 1288 aa25.76■■□□□ 1.71
PTPN18-208ENST00000462996 TSR2Q969E8 191 aaKnown RBP25.76■■□□□ 1.71
PTPN18-208ENST00000462996 TDRD3Q9H7E2 651 aaKnown RBP25.76■■□□□ 1.71
PTPN18-208ENST00000462996 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
PTPN18-208ENST00000462996 VGLL4Q14135 290 aa25.75■■□□□ 1.71
PTPN18-208ENST00000462996 ARHGAP39Q9C0H5 1083 aa25.75■■□□□ 1.71
PTPN18-208ENST00000462996 GTF2A2P52657 109 aa25.74■■□□□ 1.71
PTPN18-208ENST00000462996 FOXO4P98177 505 aa25.74■■□□□ 1.71
PTPN18-208ENST00000462996 TNFAIP1Q13829 316 aa25.74■■□□□ 1.71
PTPN18-208ENST00000462996 MAP3K9P80192 1104 aa25.73■■□□□ 1.71
PTPN18-208ENST00000462996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.73■■□□□ 1.71
PTPN18-208ENST00000462996 TMEM39BQ9GZU3 492 aa25.73■■□□□ 1.71
PTPN18-208ENST00000462996 MYH16Q9H6N6 1097 aa25.73■■□□□ 1.71
PTPN18-208ENST00000462996 FAM205AQ6ZU69 1335 aa25.72■■□□□ 1.71
PTPN18-208ENST00000462996 IFIT5Q13325 482 aaKnown RBP25.72■■□□□ 1.71
PTPN18-208ENST00000462996 LINS1Q8NG48 757 aa25.72■■□□□ 1.71
PTPN18-208ENST00000462996 TCP10L2B9ZVM9 353 aa25.71■■□□□ 1.71
PTPN18-208ENST00000462996 FLIIQ13045 1269 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms