RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 TRIM11Q96F44 468 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 LACRTQ9GZZ8 138 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 PARP2Q9UGN5 583 aa7.52□□□□□ -1.21
PRPF4B-202ENST00000461612 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 RAC1P63000 192 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 FAM117BQ6P1L5 589 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 NXPE4Q6UWF7 544 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 ASAP3Q8TDY4 903 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 C12orf49Q9H741 205 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 AK5Q9Y6K8 562 aa7.51□□□□□ -1.21
PRPF4B-202ENST00000461612 H3BRJ5 948 aa7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 GRIA4P48058 902 aa7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 PRRT3Q5FWE3 981 aa7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 OSBPL7Q9BZF2 842 aa7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 FAM8A1Q9UBU6 413 aa7.5□□□□□ -1.21
PRPF4B-202ENST00000461612 ZNF16P17020 682 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 EIF4BP23588 611 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 GSTT1P30711 240 aa7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 PSMD2Q13200 908 aa7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 ADAMTSL4Q6UY14 1074 aa7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 ANKRD24Q8TF21 1146 aa7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 CLEC4MQ9H2X3 399 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 OSGEPQ9NPF4 335 aa7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
PRPF4B-202ENST00000461612 A0A0A0MRY4 1105 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 EPHA1P21709 976 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 ARL4DP49703 201 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 PIP4K2BP78356 416 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 VN1R5Q7Z5H4 357 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 FBXO11Q86XK2 927 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 KLHL23Q8NBE8 558 aa7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 SOX17Q9H6I2 414 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-202ENST00000461612 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 LINC01387J3KSC0 135 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 SORBS3O60504 671 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 FCGRTP55899 365 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 IKBKEQ14164 716 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 ZNF576Q9H609 170 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 PPM1HQ9ULR3 514 aa7.47□□□□□ -1.21
PRPF4B-202ENST00000461612 FSCN2O14926 492 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 ELNP15502 786 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 KCNMA1Q12791 1236 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 SETDB1Q15047 1291 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 SEC31BQ9NQW1 1179 aa7.46□□□□□ -1.22
PRPF4B-202ENST00000461612 SOX1O00570 391 aaPredicted RBP7.45□□□□□ -1.22
PRPF4B-202ENST00000461612 C3orf58Q8NDZ4 430 aa7.45□□□□□ -1.22
PRPF4B-202ENST00000461612 B3GALT4O96024 378 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 USP17L7P0C7H9 530 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 COL8A1P27658 744 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 C19orf57Q0VDD7 668 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 NACC1Q96RE7 527 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 RNF19AQ9NV58 838 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
PRPF4B-202ENST00000461612 DLL1O00548 723 aa7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 DEAF1O75398 565 aaPredicted RBP7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 VAMP1P23763 118 aa7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 ZNF423Q2M1K9 1284 aa7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 IGF2-ASQ6U949 168 aa7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 CEP44Q9C0F1 390 aa7.43□□□□□ -1.22
PRPF4B-202ENST00000461612 CDC25BP30305 580 aa7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 CD68P34810 354 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 PPP2R3AQ06190 1150 aa7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 TXNDC11Q6PKC3 985 aa7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 KLHDC7BQ96G42 594 aa7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
PRPF4B-202ENST00000461612 C9orf172C9J069 976 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 TM4SF5O14894 197 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 APBA3O96018 575 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 GALNT11Q8NCW6 608 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 SLC7A3Q8WY07 619 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 CRELD1Q96HD1 420 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 TMEM39AQ9NV64 488 aa7.41□□□□□ -1.22
PRPF4B-202ENST00000461612 FAM229AH3BQW9 127 aa7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 ST13P50502 369 aaKnown RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 TAF1CQ15572 869 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 LENG1Q96BZ8 264 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-202ENST00000461612 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms