RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 IKBKEQ14164 716 aa8.3□□□□□ -1.08
UBA3-204ENST00000461522 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
UBA3-204ENST00000461522 ASAP3Q8TDY4 903 aa8.3□□□□□ -1.08
UBA3-204ENST00000461522 A0A1W2PP55 124 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 IGHA2P01877 340 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 NEFLP07196 543 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 ARL4DP49703 201 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 NLRP12P59046 1061 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 UVSSAQ2YD98 709 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 USPL1Q5W0Q7 1092 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 ARMC10Q8N2F6 343 aa8.29□□□□□ -1.08
UBA3-204ENST00000461522 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
UBA3-204ENST00000461522 SOX17Q9H6I2 414 aaPredicted RBP8.29□□□□□ -1.08
UBA3-204ENST00000461522 SLC51AQ86UW1 340 aa8.28□□□□□ -1.08
UBA3-204ENST00000461522 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
UBA3-204ENST00000461522 TCF12Q99081 682 aa8.28□□□□□ -1.08
UBA3-204ENST00000461522 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
UBA3-204ENST00000461522 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 METTL12A8MUP2 240 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 ESRRAP11474 423 aaPredicted RBP8.27□□□□□ -1.09
UBA3-204ENST00000461522 FSTP19883 344 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 ORC1Q13415 861 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 RNF208Q9H0X6 261 aa8.27□□□□□ -1.09
UBA3-204ENST00000461522 GNEQ9Y223 722 aaKnown RBP8.27□□□□□ -1.09
UBA3-204ENST00000461522 MEGF11A6BM72 1044 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 GPR182O15218 404 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
UBA3-204ENST00000461522 KIAA0319Q5VV43 1072 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 ANKRD34AQ69YU3 496 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 RUSC1Q9BVN2 902 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
UBA3-204ENST00000461522 A0A096LPE4 126 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 A0A1W2PPZ6 126 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 CPNE3O75131 537 aaKnown RBP8.25□□□□□ -1.09
UBA3-204ENST00000461522 BRD1O95696 1058 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 GRIA4P48058 902 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 UTP4Q969X6 686 aaKnown RBP8.25□□□□□ -1.09
UBA3-204ENST00000461522 MYRFLQ96LU7 910 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 RBCK1Q9BYM8 510 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 RNF112Q9ULX5 631 aa8.25□□□□□ -1.09
UBA3-204ENST00000461522 PREPP48147 710 aa8.24□□□□□ -1.09
UBA3-204ENST00000461522 LRP8Q14114 963 aa8.24□□□□□ -1.09
UBA3-204ENST00000461522 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.24□□□□□ -1.09
UBA3-204ENST00000461522 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
UBA3-204ENST00000461522 ZFP64Q9NPA5 681 aa8.24□□□□□ -1.09
UBA3-204ENST00000461522 STOML1Q9UBI4 398 aa8.24□□□□□ -1.09
UBA3-204ENST00000461522 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 ALKBH8Q96BT7 664 aaKnown RBP8.23□□□□□ -1.09
UBA3-204ENST00000461522 DMRTB1Q96MA1 342 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 USP26Q9BXU7 913 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 TMPRSS13Q9BYE2 586 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 NRSN2Q9GZP1 204 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 NIF3L1Q9GZT8 377 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
UBA3-204ENST00000461522 NPHS2Q9NP85 383 aa8.23□□□□□ -1.09
UBA3-204ENST00000461522 EIF1AYO14602 144 aaKnown RBP8.22□□□□□ -1.09
UBA3-204ENST00000461522 GSC2O15499 205 aa8.22□□□□□ -1.09
UBA3-204ENST00000461522 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
UBA3-204ENST00000461522 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
UBA3-204ENST00000461522 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
UBA3-204ENST00000461522 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
UBA3-204ENST00000461522 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
UBA3-204ENST00000461522 SART1O43290 800 aaKnown RBP8.21□□□□□ -1.1
UBA3-204ENST00000461522 DLGAP3O95886 979 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 IGLV1-40P01703 118 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 GSTM4Q03013 218 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 FDX2Q6P4F2 183 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 SMG8Q8ND04 991 aaKnown RBP8.21□□□□□ -1.1
UBA3-204ENST00000461522 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 EHD4Q9H223 541 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 C7orf69Q9H7B7 122 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 SUGCTQ9HAC7 445 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 HIF3AQ9Y2N7 669 aa8.21□□□□□ -1.1
UBA3-204ENST00000461522 HYAL3O43820 417 aaPredicted RBP8.2□□□□□ -1.1
UBA3-204ENST00000461522 TIAF1O95411 115 aa8.2□□□□□ -1.1
UBA3-204ENST00000461522 ITPKAP23677 461 aa8.2□□□□□ -1.1
UBA3-204ENST00000461522 CLEC10AQ8IUN9 316 aa8.2□□□□□ -1.1
UBA3-204ENST00000461522 TRIM42Q8IWZ5 723 aa8.2□□□□□ -1.1
UBA3-204ENST00000461522 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
UBA3-204ENST00000461522 BMP3P12645 472 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 NUTM2GQ5VZR2 741 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
UBA3-204ENST00000461522 TMC7Q7Z402 723 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 FAM83CQ9BQN1 747 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 DCTN4Q9UJW0 460 aa8.19□□□□□ -1.1
UBA3-204ENST00000461522 HMX2A2RU54 273 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 B3GALT4O96024 378 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
UBA3-204ENST00000461522 NFIAQ12857 509 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 EXOSC6Q5RKV6 272 aaKnown RBP8.18□□□□□ -1.1
UBA3-204ENST00000461522 RNF43Q68DV7 783 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 CYP4F12Q9HCS2 524 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
UBA3-204ENST00000461522 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
UBA3-204ENST00000461522 BEND4Q6ZU67 534 aa8.17□□□□□ -1.1
UBA3-204ENST00000461522 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms