RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TNRC6CQ9HCJ0 1690 aaKnown RBP9.28□□□□□ -0.92
RTN4-212ENST00000461004 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 ANKRD36CQ5JPF3 1778 aa9.27□□□□□ -0.92
RTN4-212ENST00000461004 IBTKQ9P2D0 1353 aaPredicted RBP9.27□□□□□ -0.93
RTN4-212ENST00000461004 IRS4O14654 1257 aaPredicted RBP9.27□□□□□ -0.93
RTN4-212ENST00000461004 CT47B1P0C2W7 299 aaPredicted RBP9.27□□□□□ -0.93
RTN4-212ENST00000461004 TUSC1Q2TAM9 212 aa9.27□□□□□ -0.93
RTN4-212ENST00000461004 OLFM4Q6UX06 510 aa9.27□□□□□ -0.93
RTN4-212ENST00000461004 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
RTN4-212ENST00000461004 COL11A2P13942 1736 aaPredicted RBP9.27□□□□□ -0.93
RTN4-212ENST00000461004 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 H7C1W4 665 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 LILRB3O75022 631 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 PCCAP05165 728 aaPredicted RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 CASP7P55210 303 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 NEXNQ0ZGT2 675 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 GCKRQ14397 625 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 CRY2Q49AN0 593 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 UBE3BQ7Z3V4 1068 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 LINS1Q8NG48 757 aa9.26□□□□□ -0.93
RTN4-212ENST00000461004 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 FRAT1Q92837 279 aaPredicted RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
RTN4-212ENST00000461004 C21orf2O43822 256 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 NPR1P16066 1061 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 STYK1Q6J9G0 422 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 TTLL6Q8N841 843 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 MASTLQ96GX5 879 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 NLRP3Q96P20 1036 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 PRR14Q9BWN1 585 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 PCDHB3Q9Y5E6 796 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 COL4A1P02462 1669 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 PTPRCP08575 1304 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 UTRNP46939 3433 aa9.25□□□□□ -0.93
RTN4-212ENST00000461004 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 BRCA1P38398 1863 aaKnown RBP9.24□□□□□ -0.93
RTN4-212ENST00000461004 NBPF7P0C2Y1 421 aaPredicted RBP9.24□□□□□ -0.93
RTN4-212ENST00000461004 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
RTN4-212ENST00000461004 PRELPP51888 382 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 MMRN1Q13201 1228 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
RTN4-212ENST00000461004 C7orf43Q8WVR3 580 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
RTN4-212ENST00000461004 DDX60Q8IY21 1712 aaKnown RBP9.23□□□□□ -0.93
RTN4-212ENST00000461004 GOLGB1Q14789 3259 aaKnown RBP9.23□□□□□ -0.93
RTN4-212ENST00000461004 PLIN1O60240 522 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 PDE8AO60658 829 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 TRIM27P14373 513 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 COPS2P61201 443 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 RASSF7Q02833 373 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
RTN4-212ENST00000461004 PPP2R2DQ66LE6 453 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 ARHGAP27Q6ZUM4 889 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 SCUBE3Q8IX30 993 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 RPGRQ92834 1020 aaKnown RBP9.23□□□□□ -0.93
RTN4-212ENST00000461004 CELF1Q92879 486 aaKnown RBP9.23□□□□□ -0.93
RTN4-212ENST00000461004 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 KAZALD1Q96I82 304 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 USP44Q9H0E7 712 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 ABCC4O15439 1325 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 RNF123Q5XPI4 1314 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 TAF1P21675 1872 aa9.23□□□□□ -0.93
RTN4-212ENST00000461004 RIC1Q4ADV7 1423 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 GRM8O00222 908 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 RLBP1P12271 317 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 FOXO4P98177 505 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 GRIPAP1Q4V328 841 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 ATF7IPQ6VMQ6 1270 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 TTLL11Q8NHH1 800 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 ARHGAP45Q92619 1136 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 THAP11Q96EK4 314 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
RTN4-212ENST00000461004 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 API5Q9BZZ5 524 aaKnown RBP9.22□□□□□ -0.93
RTN4-212ENST00000461004 C9orf78Q9NZ63 289 aaPredicted RBP9.22□□□□□ -0.93
RTN4-212ENST00000461004 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 CDHR2Q9BYE9 1310 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 LAMB2P55268 1798 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 DLEC1Q9Y238 1755 aa9.22□□□□□ -0.93
RTN4-212ENST00000461004 NFKBIEO00221 500 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 GRIN3BO60391 1043 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 ALDH1B1P30837 517 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 RFC5P40937 340 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 CTSWP56202 376 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 TJAP1Q5JTD0 557 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 PRPF38BQ5VTL8 546 aaKnown RBP9.21□□□□□ -0.94
RTN4-212ENST00000461004 ZKSCAN2Q63HK3 967 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
RTN4-212ENST00000461004 DDX46Q7L014 1031 aaKnown RBP9.21□□□□□ -0.94
RTN4-212ENST00000461004 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms