RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 CHADLQ6NUI6 762 aa25.49■■□□□ 1.67
RPUSD3-210ENST00000460909 SAMD7Q7Z3H4 446 aa25.49■■□□□ 1.67
RPUSD3-210ENST00000460909 IQSEC3Q9UPP2 1182 aaPredicted RBP25.49■■□□□ 1.67
RPUSD3-210ENST00000460909 JAG2Q9Y219 1238 aa25.49■■□□□ 1.67
RPUSD3-210ENST00000460909 USP17L8P0C7I0 530 aa25.48■■□□□ 1.67
RPUSD3-210ENST00000460909 GPR108Q9NPR9 543 aa25.48■■□□□ 1.67
RPUSD3-210ENST00000460909 EXOC6BQ9Y2D4 811 aa25.48■■□□□ 1.67
RPUSD3-210ENST00000460909 SUPT16HQ9Y5B9 1047 aaKnown RBP25.48■■□□□ 1.67
RPUSD3-210ENST00000460909 HMMRO75330 724 aa25.47■■□□□ 1.67
RPUSD3-210ENST00000460909 OS9Q13438 667 aaPredicted RBP25.47■■□□□ 1.67
RPUSD3-210ENST00000460909 XAGE2Q96GT9 111 aa25.47■■□□□ 1.67
RPUSD3-210ENST00000460909 PGAP2Q9UHJ9 254 aa25.47■■□□□ 1.67
RPUSD3-210ENST00000460909 MYH13Q9UKX3 1938 aa25.46■■□□□ 1.67
RPUSD3-210ENST00000460909 ZBTB22O15209 634 aa25.46■■□□□ 1.67
RPUSD3-210ENST00000460909 PHKA1P46020 1223 aa25.46■■□□□ 1.67
RPUSD3-210ENST00000460909 TBC1D10BQ4KMP7 808 aaPredicted RBP25.46■■□□□ 1.67
RPUSD3-210ENST00000460909 CCDC102BQ68D86 513 aa25.45■■□□□ 1.66
RPUSD3-210ENST00000460909 KIAA0825Q8IV33 1275 aa25.45■■□□□ 1.66
RPUSD3-210ENST00000460909 CLEC11AQ9Y240 323 aa25.45■■□□□ 1.66
RPUSD3-210ENST00000460909 COL1A1P02452 1464 aaPredicted RBP25.45■■□□□ 1.66
RPUSD3-210ENST00000460909 TNNI3KQ59H18 835 aa25.44■■□□□ 1.66
RPUSD3-210ENST00000460909 ZC3H15Q8WU90 426 aaKnown RBP25.44■■□□□ 1.66
RPUSD3-210ENST00000460909 NEUROD6Q96NK8 337 aa25.44■■□□□ 1.66
RPUSD3-210ENST00000460909 PCDHB15Q9Y5E8 787 aa25.44■■□□□ 1.66
RPUSD3-210ENST00000460909 FPGT-TNNI3KV9GXZ4 949 aa25.44■■□□□ 1.66
RPUSD3-210ENST00000460909 ITGBL1O95965 494 aaPredicted RBP25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 MMP14P50281 582 aa25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 KIF4BQ2VIQ3 1234 aa25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 HSP90AB4PQ58FF6 505 aa25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 MFSD14BQ5SR56 506 aa25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 RBM26Q5T8P6 1007 aaKnown RBP25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 MAP1SQ66K74 1059 aaPredicted RBP25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 MYOZ2Q9NPC6 264 aa25.43■■□□□ 1.66
RPUSD3-210ENST00000460909 FRAT2O75474 233 aaPredicted RBP25.42■■□□□ 1.66
RPUSD3-210ENST00000460909 CHAF1AQ13111 956 aaPredicted RBP25.42■■□□□ 1.66
RPUSD3-210ENST00000460909 ERC1Q8IUD2 1116 aa25.42■■□□□ 1.66
RPUSD3-210ENST00000460909 OGFOD1Q8N543 542 aa25.42■■□□□ 1.66
RPUSD3-210ENST00000460909 GRIK5Q16478 980 aa25.41■■□□□ 1.66
RPUSD3-210ENST00000460909 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
RPUSD3-210ENST00000460909 GNL3LQ9NVN8 582 aaKnown RBP25.41■■□□□ 1.66
RPUSD3-210ENST00000460909 SEMA3EO15041 775 aa25.4■■□□□ 1.66
RPUSD3-210ENST00000460909 RHPN1Q8TCX5 695 aa25.4■■□□□ 1.66
RPUSD3-210ENST00000460909 TBC1D22AQ8WUA7 517 aa25.4■■□□□ 1.66
RPUSD3-210ENST00000460909 EAF2Q96CJ1 260 aaPredicted RBP25.4■■□□□ 1.66
RPUSD3-210ENST00000460909 ZBED3Q96IU2 234 aaPredicted RBP25.39■■□□□ 1.66
RPUSD3-210ENST00000460909 PASKQ96RG2 1323 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 POLR2AP24928 1970 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 F8W031 263 aaPredicted RBP25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 HSPA6P17066 643 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 RASGRF1Q13972 1273 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 DBNDD2Q9BQY9 259 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 DBNLQ9UJU6 430 aaKnown RBP25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 HDAC9Q9UKV0 1011 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 DENND2AQ9ULE3 1009 aa25.38■■□□□ 1.65
RPUSD3-210ENST00000460909 ASTN2O75129 1339 aaPredicted RBP25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 RAB11FIP3O75154 756 aa25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 ARID4AP29374 1257 aaPredicted RBP25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 SCARF1Q14162 830 aa25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 MTMR14Q8NCE2 650 aa25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 WDR66Q8TBY9 1149 aa25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 TLR7Q9NYK1 1049 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 PDS5AQ29RF7 1337 aaKnown RBP25.37■■□□□ 1.65
RPUSD3-210ENST00000460909 WNT10BO00744 389 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 NBPF9Q3BBW0 867 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 GORABQ5T7V8 394 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 DCTPP1Q9H773 170 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 IL1RAPL2Q9NP60 686 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 TTF2Q9UNY4 1162 aaKnown RBP25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 SALL1Q9NSC2 1324 aa25.36■■□□□ 1.65
RPUSD3-210ENST00000460909 AAMPQ13685 434 aa25.35■■□□□ 1.65
RPUSD3-210ENST00000460909 EXOC6Q8TAG9 804 aa25.35■■□□□ 1.65
RPUSD3-210ENST00000460909 CCDC8Q9H0W5 538 aaPredicted RBP25.35■■□□□ 1.65
RPUSD3-210ENST00000460909 SUGT1Q9Y2Z0 365 aa25.35■■□□□ 1.65
RPUSD3-210ENST00000460909 PCDHAC2Q9Y5I4 1007 aa25.35■■□□□ 1.65
RPUSD3-210ENST00000460909 APBB1O00213 710 aa25.34■■□□□ 1.65
RPUSD3-210ENST00000460909 GLIS2Q9BZE0 524 aaPredicted RBP25.34■■□□□ 1.65
RPUSD3-210ENST00000460909 HMG20BQ9P0W2 317 aa25.34■■□□□ 1.65
RPUSD3-210ENST00000460909 CEP350Q5VT06 3117 aa25.34■■□□□ 1.65
RPUSD3-210ENST00000460909 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
RPUSD3-210ENST00000460909 FMR1Q06787 632 aaKnown RBP eCLIP25.33■■□□□ 1.65
RPUSD3-210ENST00000460909 GGA3Q9NZ52 723 aa25.33■■□□□ 1.65
RPUSD3-210ENST00000460909 SERPINA10Q9UK55 444 aa25.33■■□□□ 1.65
RPUSD3-210ENST00000460909 TRAF5O00463 557 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 UQCRFS1P1P0C7P4 283 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 MCAMP43121 646 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 APLP1P51693 650 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 DLGAP5Q15398 846 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 CFAP100Q494V2 611 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 ANGEL2Q5VTE6 544 aaKnown RBP25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 PI16Q6UXB8 463 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 AACSQ86V21 672 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 ZNF512BQ96KM6 892 aaPredicted RBP25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 ECM29Q5VYK3 1845 aa25.32■■□□□ 1.64
RPUSD3-210ENST00000460909 SPDYE2BA6NHP3 402 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 SPDYE6P0CI01 402 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 HDLBPQ00341 1268 aaKnown RBP25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 CCDC158Q5M9N0 1113 aa25.31■■□□□ 1.64
RPUSD3-210ENST00000460909 CLASRPQ8N2M8 674 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms