RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
CSDC2-202ENST00000460790 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
CSDC2-202ENST00000460790 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
CSDC2-202ENST00000460790 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
CSDC2-202ENST00000460790 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
CSDC2-202ENST00000460790 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
CSDC2-202ENST00000460790 RUFY2Q8WXA3 655 aa13.18□□□□□ -0.3
CSDC2-202ENST00000460790 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
CSDC2-202ENST00000460790 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
CSDC2-202ENST00000460790 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
CSDC2-202ENST00000460790 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CSDC2-202ENST00000460790 SGSM2O43147 1006 aa13.17□□□□□ -0.3
CSDC2-202ENST00000460790 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
CSDC2-202ENST00000460790 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
CSDC2-202ENST00000460790 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
CSDC2-202ENST00000460790 PSMD1Q99460 953 aa13.17□□□□□ -0.3
CSDC2-202ENST00000460790 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
CSDC2-202ENST00000460790 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 CCDC88AQ3V6T2 1871 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 ARFGEF1Q9Y6D6 1849 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
CSDC2-202ENST00000460790 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 ZSCAN25Q6NSZ9 544 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
CSDC2-202ENST00000460790 IL25Q9H293 177 aa13.16□□□□□ -0.3
CSDC2-202ENST00000460790 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 SOCS7O14512 581 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
CSDC2-202ENST00000460790 REC8O95072 547 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 CHGBP05060 677 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 ADD2P35612 726 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
CSDC2-202ENST00000460790 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
CSDC2-202ENST00000460790 FAM205AQ6ZU69 1335 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 RAD50Q92878 1312 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
CSDC2-202ENST00000460790 IGSF3O75054 1194 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
CSDC2-202ENST00000460790 UBE3CQ15386 1083 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
CSDC2-202ENST00000460790 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
CSDC2-202ENST00000460790 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 WWC3Q9ULE0 1092 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
CSDC2-202ENST00000460790 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 G3V3G9 751 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 PDE6AP16499 860 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
CSDC2-202ENST00000460790 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 APPBP2Q92624 585 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
CSDC2-202ENST00000460790 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
CSDC2-202ENST00000460790 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 AOC3Q16853 763 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
CSDC2-202ENST00000460790 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 MAGEB6Q8N7X4 407 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
CSDC2-202ENST00000460790 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 JAG2Q9Y219 1238 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
CSDC2-202ENST00000460790 ZNF532Q9HCE3 1301 aa13.12□□□□□ -0.31
CSDC2-202ENST00000460790 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 GTF2IP78347 998 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
CSDC2-202ENST00000460790 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
CSDC2-202ENST00000460790 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
CSDC2-202ENST00000460790 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
CSDC2-202ENST00000460790 M0R2C6 588 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 ECE2O60344 883 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
CSDC2-202ENST00000460790 PRDX5P30044 214 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
CSDC2-202ENST00000460790 MECOMQ03112 1051 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 PTH1RQ03431 593 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 MFSD14BQ5SR56 506 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 LARGE2Q8N3Y3 721 aa13.1□□□□□ -0.31
CSDC2-202ENST00000460790 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms