RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SOX13Q9UN79 622 aa5.48□□□□□ -1.53
SYPL1-203ENST00000460770 POLIQ9UNA4 740 aa5.48□□□□□ -1.53
SYPL1-203ENST00000460770 DDX3YO15523 660 aaKnown RBP5.47□□□□□ -1.53
SYPL1-203ENST00000460770 ADAM11O75078 769 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 TNFRSF21O75509 655 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 NPR3P17342 541 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYPL1-203ENST00000460770 CPSF6Q16630 551 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYPL1-203ENST00000460770 ZDHHC13Q8IUH4 622 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 DDX54Q8TDD1 881 aaKnown RBP5.47□□□□□ -1.53
SYPL1-203ENST00000460770 NXPE3Q969Y0 559 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 YIPF2Q9BWQ6 316 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 AMOTL2Q9Y2J4 779 aa5.47□□□□□ -1.53
SYPL1-203ENST00000460770 HMX2A2RU54 273 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 NFKBIEO00221 500 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 TM4SF5O14894 197 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 TGFB1P01137 390 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 RXRBP28702 533 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 C12orf50Q8NA57 414 aaPredicted RBP5.46□□□□□ -1.54
SYPL1-203ENST00000460770 ASAP3Q8TDY4 903 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 USP26Q9BXU7 913 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 BHLHE41Q9C0J9 482 aaPredicted RBP5.46□□□□□ -1.54
SYPL1-203ENST00000460770 CHRDQ9H2X0 955 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 ATG3Q9NT62 314 aa5.46□□□□□ -1.54
SYPL1-203ENST00000460770 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
SYPL1-203ENST00000460770 ARID3CA6NKF2 412 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 TMEM88BA6NKF7 163 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 TXKP42681 527 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 PREPP48147 710 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 USP11P51784 963 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 CCDC82Q8N4S0 544 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 SMG8Q8ND04 991 aaKnown RBP5.45□□□□□ -1.54
SYPL1-203ENST00000460770 SUGCTQ9HAC7 445 aa5.45□□□□□ -1.54
SYPL1-203ENST00000460770 A6NHS1 94 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 EREGO14944 169 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 WNT11O96014 354 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 ABL1P00519 1130 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 MAP4P27816 1152 aaKnown RBP5.44□□□□□ -1.54
SYPL1-203ENST00000460770 GP2P55259 537 aaKnown RBP5.44□□□□□ -1.54
SYPL1-203ENST00000460770 HNRNPUQ00839 825 aaKnown RBP eCLIP5.44□□□□□ -1.54
SYPL1-203ENST00000460770 PAOXQ6QHF9 649 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 SHKBP1Q8TBC3 707 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
SYPL1-203ENST00000460770 GTF3C3Q9Y5Q9 886 aa5.44□□□□□ -1.54
SYPL1-203ENST00000460770 WDR64B1ANS9 1081 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 SOX1O00570 391 aaPredicted RBP5.43□□□□□ -1.54
SYPL1-203ENST00000460770 CYP11A1P05108 521 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 ACPPP15309 386 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 SPINK2P20155 84 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 GSTM4Q03013 218 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 MTMR3Q13615 1198 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 EXOSC6Q5RKV6 272 aaKnown RBP5.43□□□□□ -1.54
SYPL1-203ENST00000460770 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 VN1R5Q7Z5H4 357 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 DTX1Q86Y01 620 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 GJD3Q8N144 294 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 OSBPL1AQ9BXW6 950 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 TMPRSS13Q9BYE2 586 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 PIM2Q9P1W9 311 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 ANGEL1Q9UNK9 670 aaKnown RBP5.43□□□□□ -1.54
SYPL1-203ENST00000460770 USTQ9Y2C2 406 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 LEMD3Q9Y2U8 911 aa5.43□□□□□ -1.54
SYPL1-203ENST00000460770 LOC100289279A0A1B0GTE1 492 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 FAM95CA0A1B0GW59 222 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 TRPA1O75762 1119 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 ESRRAP11474 423 aaPredicted RBP5.42□□□□□ -1.54
SYPL1-203ENST00000460770 PDE3BQ13370 1112 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 HHIPQ96QV1 700 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 ZFYVE28Q9HCC9 887 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 BRPF3Q9ULD4 1205 aa5.42□□□□□ -1.54
SYPL1-203ENST00000460770 PRR19A6NJB7 356 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 NDUFB5O43674 189 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 FZD6O60353 706 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 TIAF1O95411 115 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 PDE4CQ08493 712 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 MFSD14AQ96MC6 490 aa5.41□□□□□ -1.54
SYPL1-203ENST00000460770 CLEC4MQ9H2X3 399 aaPredicted RBP5.41□□□□□ -1.54
SYPL1-203ENST00000460770 FOXD3Q9UJU5 478 aaPredicted RBP5.41□□□□□ -1.54
SYPL1-203ENST00000460770 CYP27A1Q02318 531 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 NFKBIBQ15653 356 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 SGO2Q562F6 1265 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 GLYCTKQ8IVS8 523 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 FBXL6Q8N531 539 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 GOLGA2P5Q9HBQ8 144 aa5.4□□□□□ -1.54
SYPL1-203ENST00000460770 OAS3Q9Y6K5 1087 aaKnown RBP5.4□□□□□ -1.54
SYPL1-203ENST00000460770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.4□□□□□ -1.54
SYPL1-203ENST00000460770 A0A096LPE4 126 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 A0A1W2PPZ6 126 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 MED26O95402 600 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 FOSL1P15407 271 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 SOX4Q06945 474 aaPredicted RBP5.39□□□□□ -1.55
SYPL1-203ENST00000460770 PCDH1Q08174 1060 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 MAP7Q14244 749 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 PEAR1Q5VY43 1037 aaPredicted RBP5.39□□□□□ -1.55
SYPL1-203ENST00000460770 CCNJLQ8IV13 435 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 CITED4Q96RK1 184 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
SYPL1-203ENST00000460770 LIN7BQ9HAP6 207 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms