RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 DZANK1Q9NVP4 752 aa5.71□□□□□ -1.5
VPS8-215ENST00000460158 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
VPS8-215ENST00000460158 NFKBIEO00221 500 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 HYAL3O43820 417 aaPredicted RBP5.7□□□□□ -1.5
VPS8-215ENST00000460158 GADD45BO75293 160 aaPredicted RBP5.7□□□□□ -1.5
VPS8-215ENST00000460158 KIAA0319Q5VV43 1072 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 ELMSAN1Q6PJG2 1045 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 TTC9Q92623 222 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 FAM161BQ96MY7 647 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 HHIPQ96QV1 700 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 SMG9Q9H0W8 520 aaKnown RBP5.7□□□□□ -1.5
VPS8-215ENST00000460158 NLRP2Q9NX02 1062 aa5.7□□□□□ -1.5
VPS8-215ENST00000460158 FGD1P98174 961 aa5.69□□□□□ -1.5
VPS8-215ENST00000460158 IGF2-ASQ6U949 168 aa5.69□□□□□ -1.5
VPS8-215ENST00000460158 WFDC12Q8WWY7 111 aa5.69□□□□□ -1.5
VPS8-215ENST00000460158 PBX4Q9BYU1 374 aa5.69□□□□□ -1.5
VPS8-215ENST00000460158 RBSNQ9H1K0 784 aa5.69□□□□□ -1.5
VPS8-215ENST00000460158 UNCXA6NJT0 531 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 GNA15P30679 374 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 DAB2P98082 770 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 XPCQ01831 940 aaPredicted RBP5.68□□□□□ -1.5
VPS8-215ENST00000460158 GRM2Q14416 872 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 GRIK5Q16478 980 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 CEP135Q66GS9 1140 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 NXPE4Q6UWF7 544 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 ADAMTSL4Q6UY14 1074 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 SLC51AQ86UW1 340 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 GLIS3Q8NEA6 775 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 TCF12Q99081 682 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 POP1Q99575 1024 aaKnown RBP5.68□□□□□ -1.5
VPS8-215ENST00000460158 BCO2Q9BYV7 579 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 OSBPL7Q9BZF2 842 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 EHD4Q9H223 541 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 LIN7BQ9HAP6 207 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 RNF112Q9ULX5 631 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
VPS8-215ENST00000460158 METTL12A8MUP2 240 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 PDE2AO00408 941 aaPredicted RBP5.67□□□□□ -1.5
VPS8-215ENST00000460158 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS8-215ENST00000460158 RBM25P49756 843 aaKnown RBP5.67□□□□□ -1.5
VPS8-215ENST00000460158 PSMD2Q13200 908 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 TMC4Q7Z404 712 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 WFDC8Q8IUA0 241 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 CCNJLQ8IV13 435 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 TMEM102Q8N9M5 508 aaPredicted RBP5.67□□□□□ -1.5
VPS8-215ENST00000460158 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 SPG7Q9UQ90 795 aa5.67□□□□□ -1.5
VPS8-215ENST00000460158 NOS3P29474 1203 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 GRIA4P48058 902 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 IREB2P48200 963 aaKnown RBP5.66□□□□□ -1.5
VPS8-215ENST00000460158 GDF6Q6KF10 455 aaPredicted RBP5.66□□□□□ -1.5
VPS8-215ENST00000460158 ASAP3Q8TDY4 903 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 FRMD6Q96NE9 622 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 BHLHE41Q9C0J9 482 aaPredicted RBP5.66□□□□□ -1.5
VPS8-215ENST00000460158 LACRTQ9GZZ8 138 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 AK5Q9Y6K8 562 aa5.66□□□□□ -1.5
VPS8-215ENST00000460158 SPRED3Q2MJR0 410 aa5.65□□□□□ -1.5
VPS8-215ENST00000460158 PRPF40BQ6NWY9 871 aaKnown RBP5.65□□□□□ -1.5
VPS8-215ENST00000460158 C12orf49Q9H741 205 aa5.65□□□□□ -1.5
VPS8-215ENST00000460158 ABCB6Q9NP58 842 aa5.65□□□□□ -1.5
VPS8-215ENST00000460158 KIAA1522Q9P206 1035 aaPredicted RBP5.65□□□□□ -1.5
VPS8-215ENST00000460158 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.5
VPS8-215ENST00000460158 TMEM238LA0A1B0GVL6 79 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 DLL1O00548 723 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 GIPC1O14908 333 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 SORBS3O60504 671 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 DEAF1O75398 565 aaPredicted RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 EIF4BP23588 611 aaKnown RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 FCGRTP55899 365 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 MRPL58Q14197 206 aaKnown RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 PRR23CQ6ZRP0 262 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 TMEM130Q8N3G9 435 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 MRRFQ96E11 262 aaKnown RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 MEGF10Q96KG7 1140 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 ADAM19Q9H013 955 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 MUC3BQ9H195 1237 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 SRA1Q9HD15 236 aaKnown RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 MRS2Q9HD23 443 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 SH2B1Q9NRF2 756 aaPredicted RBP5.64□□□□□ -1.51
VPS8-215ENST00000460158 VTI1BQ9UEU0 232 aa5.64□□□□□ -1.51
VPS8-215ENST00000460158 A0A096LPE4 126 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 A0A1W2PPZ6 126 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 USP17L7P0C7H9 530 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 PTPRAP18433 802 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 RANGAP1P46060 587 aaPredicted RBP5.63□□□□□ -1.51
VPS8-215ENST00000460158 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 DZIP1LQ8IYY4 767 aaKnown RBP5.63□□□□□ -1.51
VPS8-215ENST00000460158 IL22RA1Q8N6P7 574 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 DCAF11Q8TEB1 546 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 BSNDQ8WZ55 320 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 SRCIN1Q9C0H9 1055 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 PPP4R2Q9NY27 417 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 FAM8A1Q9UBU6 413 aa5.63□□□□□ -1.51
VPS8-215ENST00000460158 CTSHP09668 335 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 EPHA1P21709 976 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 ITPKAP23677 461 aa5.62□□□□□ -1.51
VPS8-215ENST00000460158 CDC27P30260 824 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms